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sw_9_scaffold_2896

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_9_scaffold_2896_1
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..1136
DNA (1134bp) protein (378aa)
conserved hypothetical membrane protein (DUF63) id=24654729 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Putative membrane protein {ECO:0000313|EMBL:ERG89688.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_9_scaffold_2896_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1183..2883)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNL1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24831.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_9_scaffold_2896_3
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2915..3280)
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=V5TL10_HALHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB66016.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_9_scaffold_2896_4
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3788..4507)
DNA (720bp) protein (240aa)
Transcription initiation factor IIB n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KCV5_HALAR
tfb4; transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_9_scaffold_2896_5
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4884..5162
DNA (279bp) protein (93aa)
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Natronococcus occultus SP4 RepID=L0JXC8_9EURY
sw_9_scaffold_2896_6
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5168..6454
DNA (1287bp) protein (429aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=141767
Glutamyl-tRNA(Gln) amidotransferase subunit A n=2 Tax=Haloarcula hispanica RepID=G0HV39_HALHT
glutamyl-tRNA(Gln) amidotransferase
sw_9_scaffold_2896_7
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7240..7587
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00036C8BC0
Uncharacterized protein {ECO:0000313|EMBL:ELZ50644.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_9_scaffold_2896_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7620..8372
DNA (753bp) protein (251aa)
3'-5' exonuclease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2H7_9EURY
3'-5' exonuclease {ECO:0000313|EMBL:EMA50905.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
hypothetical protein
sw_9_scaffold_2896_9
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8380..9504)
DNA (1125bp) protein (375aa)
Glycosyltransferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KCW0_HALAR
Glycosyltransferase {ECO:0000313|EMBL:EMA18663.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12
group 1 glycosyl transferase
sw_9_scaffold_2896_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10288..10692
DNA (405bp) protein (135aa)
Translation initiation factor 2 subunit beta n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPD9_9EURY
translation initiation factor IF-2 subunit beta
Translation initiation factor 2 subunit beta {ECO:0000256|HAMAP-Rule:MF_00232}; aIF2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; eIF-2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; TaxID=1033806 species="Archae
sw_9_scaffold_2896_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10689..10868)
DNA (180bp) protein (60aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INP7_NATPD
hypothetical protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CAI50255.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_9_scaffold_2896_12

Not on your lists

comp(10923..11027)
DNA (105bp) protein (35aa)
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archa
Displaying 12 items

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