ggKbase home page

S_p1_S3_coassembly_k141_1672347

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1672347_1
unknown

Not on your lists

73..186
DNA (114bp) protein (38aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1672347_2
unknown

Not on your lists

374..1444
DNA (1071bp) protein (357aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1672347_3

Not on your lists

1727..2833
DNA (1107bp) protein (369aa)
Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase Tax=Nitratireductor aquibiodomus RA22 RepID=I5C108_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKN34160.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
S_p1_S3_coassembly_k141_1672347_4
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

comp(2850..3506)
DNA (657bp) protein (219aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP93359.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_36_12.;"
S_p1_S3_coassembly_k141_1672347_5
unknown

Not on your lists

comp(3904..4191)
DNA (288bp) protein (96aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1672347_6

Not on your lists

comp(4309..4698)
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51265.1}; species="Archaea.;" source="archaeon GW2011_AR16.;"
id=5799837 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S_p1_S3_coassembly_k141_1672347_7
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(4730..5341)
DNA (612bp) protein (204aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:AEA47107.1}; EC=2.4.2.8 {ECO:0000313|EMBL:AEA47107.1};; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
Hypoxanthine phosphoribosyltransferase Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KT77_ARCVS
S_p1_S3_coassembly_k141_1672347_8
unknown

Not on your lists

5422..6003
DNA (582bp) protein (194aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1672347_9

Not on your lists

6098..7255
DNA (1158bp) protein (386aa)
Cell surface protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPZ7_METAC
Cell surface protein {ECO:0000313|EMBL:KHO49184.1}; species="Archaea.;" source="archaeon GW2011_AR9.;"
cell surface protein
S_p1_S3_coassembly_k141_1672347_10
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7535..7849)
DNA (315bp) protein (105aa)
id=5048700 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_1672347_11
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(7896..8606)
DNA (711bp) protein (237aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D2195
transcriptional regulator TrmB
Tax=AR1
S_p1_S3_coassembly_k141_1672347_12
unknown

Not on your lists

8707..8955
DNA (249bp) protein (83aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1672347_13
unknown

Not on your lists

8958..9230
DNA (273bp) protein (91aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1672347_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(9331..9897)
DNA (567bp) protein (189aa)
hypothetical protein; K07572 putative nucleotide binding protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_1672347_15
R_OD1_Yanofskybacteria_39_8b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(9972..10316)
DNA (345bp) protein (115aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_39_8b_curated
S_p1_S3_coassembly_k141_1672347_16
R_OD1_Yanofskybacteria_39_8b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


comp(10322..10621)
DNA (300bp) protein (100aa)
LSU ribosomal protein L21E bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L21e
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_39_8b_curated
S_p1_S3_coassembly_k141_1672347_17
R_Deltaproteobacteria_50_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10864..12210)
DNA (1347bp) protein (449aa)
Sigma-54-dependent transcriptional response regulator Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EBB4_GEOBB
sigma-54-dependent transcriptional response regulator
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_50_16_curated
S_p1_S3_coassembly_k141_1672347_18
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12658..14376
DNA (1719bp) protein (573aa)
Histone acetyltransferase Elp3 like protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Histone acetyltransferase Elp3 like protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_1672347_19
unknown

Not on your lists

14373..15275
DNA (903bp) protein (301aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1672347_20
unknown

Not on your lists

15350..15787
DNA (438bp) protein (146aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1672347_21
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15794..16561
DNA (768bp) protein (256aa)
diphthine synthase (EC:2.1.1.98)
Uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_1672347_22
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(16614..18623)
DNA (2010bp) protein (670aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
ppa; membrane-bound H(+)-translocating inorganic pyrophosphatase, vacuolar-type (EC:3.6.1.1)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Displaying 22 items

View Taxonomy