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S_p1_S3_coassembly_k141_62000

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_62000_1
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1..1110)
DNA (1110bp) protein (370aa)
mnmA; tRNA-specific 2-thiouridylase MnmA; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] bin=bin1_lowGC species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
mnmA; putative tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
Tax=CSP1_2_Dadabacteria
S_p1_S3_coassembly_k141_62000_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1136..3832)
DNA (2697bp) protein (899aa)
aconitate hydratase 1 (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] bin=bin1_lowGC species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin1_lowGC organism_group=Unknown_CP
aconitase (EC:4.2.1.3)
Tax=CSP1_2_Dadabacteria
S_p1_S3_coassembly_k141_62000_3
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(3861..4673)
DNA (813bp) protein (271aa)
Uncharacterized protein bin=bin9_gal15 species=Sporomusa ovata genus=Sporomusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
S_p1_S3_coassembly_k141_62000_4
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(4663..4995)
DNA (333bp) protein (111aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
S_p1_S3_coassembly_k141_62000_5
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

comp(5198..6748)
DNA (1551bp) protein (517aa)
GAF sensor signal transduction histidine kinase bin=GWA2_Elusimicrobia_66_18 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
S_p1_S3_coassembly_k141_62000_6
CG_Omnitr_04, Omnitrophica, Bacteria

Not on your lists

comp(6738..7526)
DNA (789bp) protein (263aa)
triosephosphate isomerase Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B311E9
triosephosphate isomerase
Tax=CG_Omnitr_04
S_p1_S3_coassembly_k141_62000_7
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(7708..8241)
DNA (534bp) protein (178aa)
hypothetical protein bin=GWA2_Elusi_like_61_42 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
Tax=CG_Elusi_04
S_p1_S3_coassembly_k141_62000_8
unknown

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comp(8241..9053)
DNA (813bp) protein (271aa)

This feature has no annotations

S_p1_S3_coassembly_k141_62000_9
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(9122..10675)
DNA (1554bp) protein (518aa)
5'-Nucleotidase domain protein bin=GWA2_Elusimicrobia_66_18 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
nucleotidase
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
S_p1_S3_coassembly_k141_62000_10
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10711..11325)
DNA (615bp) protein (205aa)
Phosphate transport regulator Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CP44_THEYO
phosphate transport regulator related to PhoU
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
S_p1_S3_coassembly_k141_62000_11
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(11327..12316)
DNA (990bp) protein (330aa)
inorganic phosphate transporter Tax=Paenisporosarcina sp. TG20 RepID=UPI0002DC8C49
phosphate transporter
Tax=BJP_08E140C01_Anaerolineales_40_8
S_p1_S3_coassembly_k141_62000_12
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

12397..12894
DNA (498bp) protein (166aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
S_p1_S3_coassembly_k141_62000_13
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

12942..13580
DNA (639bp) protein (213aa)
Ribosomal RNA small subunit methyltransferase I bin=GWA2_Elusimicrobia_51_34 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
S_p1_S3_coassembly_k141_62000_14
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13577..14176
DNA (600bp) protein (200aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis).;"
Sua5/YciO/YrdC/YwlC family protein Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GS79_FILAD
Sua5/YciO/YrdC/YwlC family protein
S_p1_S3_coassembly_k141_62000_15
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

14214..14684
DNA (471bp) protein (157aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000381632F
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
S_p1_S3_coassembly_k141_62000_16
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

14677..15960
DNA (1284bp) protein (428aa)
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
S_p1_S3_coassembly_k141_62000_17
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

15957..16592
DNA (636bp) protein (212aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01218}; EC=2.4.2.9 {ECO:0000255|HAMAP-Rule:MF_01218};; UMP pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000255|HAMAP-Rule:MF_01218}; species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 / DSM 6724).;"
Uracil phosphoribosyltransferase Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=UPP_DICTD
S_p1_S3_coassembly_k141_62000_18
unknown

Not on your lists

comp(16753..16836)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 18 items

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