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S_p1_S3_coassembly_k141_201002

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_201002_1
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists


166..1506
DNA (1341bp) protein (447aa)
Protein translocase subunit SecY bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
protein translocase subunit SecY
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
S_p1_S3_coassembly_k141_201002_2
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

1510..2163
DNA (654bp) protein (218aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).;"
Adenylate kinase Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V8W1_THELD
adenylate kinase
S_p1_S3_coassembly_k141_201002_3
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

2160..2927
DNA (768bp) protein (256aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=GWC2_Elusimicrobia_65_9_curated
S_p1_S3_coassembly_k141_201002_4
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

3024..3218
DNA (195bp) protein (65aa)
Translation initiation factor IF-1 bin=GWB2_CP_45_9 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
infA; translation initiation factor 1
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
S_p1_S3_coassembly_k141_201002_5
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists


3485..3913
DNA (429bp) protein (143aa)
30S ribosomal protein S13 bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
30S ribosomal protein S13
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
S_p1_S3_coassembly_k141_201002_6
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists


3934..4341
DNA (408bp) protein (136aa)
30S ribosomal protein S11 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZN8_THEOJ
30S ribosomal protein S11
Tax=CG_Elusi_05
S_p1_S3_coassembly_k141_201002_7
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists


4384..4992
DNA (609bp) protein (203aa)
30S ribosomal protein S4 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKF9_DESK7
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
30S ribosomal protein S4
S_p1_S3_coassembly_k141_201002_8
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

5020..6075
DNA (1056bp) protein (352aa)
DNA-directed RNA polymerase subunit alpha bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
DNA-directed RNA polymerase subunit alpha
Tax=GWA2_Elusimicrobia_69_24_curated
S_p1_S3_coassembly_k141_201002_9
RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists


6094..6459
DNA (366bp) protein (122aa)
50S ribosomal protein L17 Tax=Bacillus acidiproducens RepID=UPI0003652E7E
rplQ; 50S ribosomal protein L17
Tax=RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated
S_p1_S3_coassembly_k141_201002_10
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

6499..7536
DNA (1038bp) protein (346aa)
Cell-shape-determining protein, MreB/Mrl family bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
rod shape-determining protein MreB
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
S_p1_S3_coassembly_k141_201002_11
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7612..8472
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JYY8_9GAMM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
rod shape-determining protein MreC
S_p1_S3_coassembly_k141_201002_12
unknown

Not on your lists

8486..9025
DNA (540bp) protein (180aa)

This feature has no annotations

S_p1_S3_coassembly_k141_201002_13
GWB2_Elusimicrobia_63_22_curated, Elusimicrobia, Bacteria

Not on your lists

9013..10875
DNA (1863bp) protein (621aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein bin=GWB2_Elusimicrobium_63_22 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
Tax=GWB2_Elusimicrobia_63_22_curated
S_p1_S3_coassembly_k141_201002_14
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

10875..12284
DNA (1410bp) protein (470aa)
Cell cycle protein bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
rod shape-determining protein RodA
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
S_p1_S3_coassembly_k141_201002_15
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

12437..13804
DNA (1368bp) protein (456aa)
Putative Fe-S oxidoreductase Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZC9_UNCTG
putative Fe-S oxidoreductase
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
S_p1_S3_coassembly_k141_201002_16
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

13825..15267
DNA (1443bp) protein (481aa)
Ribonuclease, Rne/Rng family bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
ribonuclease
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
S_p1_S3_coassembly_k141_201002_17
GWA2_Elusimicrobia_51_34_curated, Elusimicrobia, Bacteria

Not on your lists

15287..16942
DNA (1656bp) protein (552aa)
Serine protease, subtilase family bin=GWA2_Elusimicrobia_51_34 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
subtilisin-like serine protease
Tax=GWA2_Elusimicrobia_51_34_curated
S_p1_S3_coassembly_k141_201002_18
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

16955..17767
DNA (813bp) protein (271aa)
Metal-dependent phosphoesterase (PHP family) protein bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
putative metal-dependent phosphoesterase
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
S_p1_S3_coassembly_k141_201002_19
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

17822..18601
DNA (780bp) protein (260aa)
Glycerophosphodiester phosphodiesterase bin=GWA2_Elusimicrobia_66_18 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
glycerophosphoryl diester phosphodiesterase family protein
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p1_S3_coassembly_k141_201002_20
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

18630..19559
DNA (930bp) protein (310aa)
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase bin=GWA2_Elusimicrobia_66_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
S_p1_S3_coassembly_k141_201002_21
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

Not on your lists

19596..19910
DNA (315bp) protein (105aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein bin=GWA2_Elusimicrobia_66_18 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
4Fe-4S ferredoxin, iron-sulfur binding protein
Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
S_p1_S3_coassembly_k141_201002_22
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(19916..20647)
DNA (732bp) protein (244aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family bin=GWA2_Elusimicrobia_66_18 species=Fervidobacterium pennivorans genus=Fervidobacterium taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
livF; ABC-type branched-chain amino acid transport systems, ATPase LivF
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p1_S3_coassembly_k141_201002_23
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(20634..21410)
DNA (777bp) protein (259aa)
ABC transporter related bin=GWA2_Elusimicrobia_66_18 species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
branched-chain amino acid ABC transporter permease/ATP-binding protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
S_p1_S3_coassembly_k141_201002_24
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(21400..22422)
DNA (1023bp) protein (341aa)
Putative High-affinity branched-chain amino acid transport system permease protein livM (LIV-I protein M) bin=GWA2_Elusimicrobia_66_18 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
livM; LivM
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
S_p1_S3_coassembly_k141_201002_25
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(22439..23335)
DNA (897bp) protein (299aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
ABC transporter permease
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
S_p1_S3_coassembly_k141_201002_26
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(23406..24539)
DNA (1134bp) protein (378aa)
UPI00020A9D1C related cluster bin=GWA2_Elusimicrobia_66_18 species=Thermodesulfobium narugense genus=Thermodesulfobium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
extracellular ligand-binding receptor
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
S_p1_S3_coassembly_k141_201002_27
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24668..25888
DNA (1221bp) protein (407aa)
carbonate dehydratase Tax=Nocardiopsis halotolerans RepID=UPI00034B4956
Copper/silver-translocating P-type ATPase {ECO:0000313|EMBL:EIF00291.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora glauca K62.;"
ctpA; heavy metal translocating P-type ATPase
S_p1_S3_coassembly_k141_201002_28
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(25878..26711)
DNA (834bp) protein (278aa)
hypothetical protein bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
S_p1_S3_coassembly_k141_201002_29
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(26708..27985)
DNA (1278bp) protein (426aa)
Glutamate-1-semialdehyde 2,1-aminomutase bin=GWA2_Elusimicrobia_69_24 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
glutamate-1-semialdehyde-2,1-aminomutase
Tax=GWA2_Elusimicrobia_69_24_curated
S_p1_S3_coassembly_k141_201002_30
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(27985..29640)
DNA (1656bp) protein (552aa)
Carbon starvation protein CstA Tax=Sorangium cellulosum So0157-2 RepID=S4Y619_SORCE
carbon starvation protein CstA
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
Displaying items 1-30 of 42 in total

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