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S_p1_S3_coassembly_k141_432691

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_432691_1
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

365..1243
DNA (879bp) protein (293aa)
Transcription termination factor Rho bin=GWA2_Elusimicrobia_69_24 species=Glaciecola psychrophila genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
transcription termination factor Rho
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
S_p1_S3_coassembly_k141_432691_2
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(1253..2482)
DNA (1230bp) protein (410aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B54C58
ATPase AAA family
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
S_p1_S3_coassembly_k141_432691_3
GWA2_Elusimicrobia_61_42_curated, Elusimicrobia, Bacteria

Not on your lists

2713..3492
DNA (780bp) protein (260aa)
Uncharacterized conserved protein bin=GWA2_Elusimicrobia_69_24 species=uncultured delta proteobacterium HF0010_08B07 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
sulfatase modifying factor 1
Tax=GWA2_Elusimicrobia_61_42_curated
S_p1_S3_coassembly_k141_432691_4
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(3600..5453)
DNA (1854bp) protein (618aa)
AAA ATPase bin=GWA2_Elusimicrobia_66_18 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
AAA ATPase
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
S_p1_S3_coassembly_k141_432691_5
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

5646..6371
DNA (726bp) protein (242aa)
Cytochrome c-type biogenesis protein CcsB bin=GWA2_Elusimicrobia_66_18 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
cytochrome c assembly protein
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
S_p1_S3_coassembly_k141_432691_6
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6386..7444
DNA (1059bp) protein (353aa)
Glutamyl-tRNA reductase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3J0_9FIRM
HemA; glutamyl-tRNA reductase
Tax=RBG_13_Deltaproteobacteria_65_10_curated
S_p1_S3_coassembly_k141_432691_7
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

7390..8334
DNA (945bp) protein (315aa)
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase Tax=Brevibacillus sp. BC25 RepID=J2ZUZ4_9BACL
Tax=CG_Elusi_04
S_p1_S3_coassembly_k141_432691_8
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8366..10666
DNA (2301bp) protein (767aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase Tax=Planctomyces maris DSM 8797 RepID=A6C0M5_9PLAN
S_p1_S3_coassembly_k141_432691_9
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10782..12545
DNA (1764bp) protein (588aa)
L-aspartate oxidase Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AJQ7_GEOSK
nadB; L-aspartate oxidase
Tax=CG_Syntroph_01
S_p1_S3_coassembly_k141_432691_10
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

12582..13184
DNA (603bp) protein (201aa)
DNA polymerase beta domain protein region Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1R0_DEHLB
hypothetical protein
Tax=RBG_16_Chloroflexi_48_8_curated
S_p1_S3_coassembly_k141_432691_11
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

13135..13590
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Dehalococcoides mccartyi DCMB5 RepID=M1R3V1_9CHLR
hypothetical protein
Tax=CG_Elusi_05
S_p1_S3_coassembly_k141_432691_12
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

13591..16476
DNA (2886bp) protein (962aa)
UvrABC system protein A bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
excinuclease ATPase subunit
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
S_p1_S3_coassembly_k141_432691_13
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

16537..17634
DNA (1098bp) protein (366aa)
nucleoside-diphosphate-sugar epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
S_p1_S3_coassembly_k141_432691_14
unknown

Not on your lists

17684..18838
DNA (1155bp) protein (385aa)

This feature has no annotations

S_p1_S3_coassembly_k141_432691_15
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

18839..19828
DNA (990bp) protein (330aa)
Transporter, DUF21, CBS domain pair and CorC_HlyC domain-containing, putative Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A2F6_PELCD
transporter
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
S_p1_S3_coassembly_k141_432691_16
unknown

Not on your lists

19852..20508
DNA (657bp) protein (219aa)

This feature has no annotations

S_p1_S3_coassembly_k141_432691_17
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20477..21364
DNA (888bp) protein (296aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GHJ0_9CYAN
S_p1_S3_coassembly_k141_432691_18
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

21361..23484
DNA (2124bp) protein (708aa)
glycine--tRNA ligase (EC:6.1.1.14)
hypothetical protein Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00036CA2DA
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
S_p1_S3_coassembly_k141_432691_19
Geomicrobium sp. JCM 19038, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23504..24616
DNA (1113bp) protein (371aa)
AfuA protein Tax=Bacillus alcalophilus ATCC 27647 RepID=J8TLT9_BACAO
Ferric iron ABC transporter, iron-binding protein {ECO:0000313|EMBL:GAK06840.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Geomicrobium.;" source="Geomicrobium sp. JCM 19038.;"
iron ABC transporter substrate-binding protein
S_p1_S3_coassembly_k141_432691_20
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

24616..25035
DNA (420bp) protein (140aa)
thioesterase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
S_p1_S3_coassembly_k141_432691_21
R_OD1_Falkowbacteria_39_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

25032..26588
DNA (1557bp) protein (519aa)
Uncharacterized protein bin=GWC2_OP3-like_45_7 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_13_curated
S_p1_S3_coassembly_k141_432691_22
Thermococcus nautili, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

26595..27407
DNA (813bp) protein (271aa)
ABC transporter related Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LP15_SYNFM
ABC-type sugar transport systems, ATPase components
ABC-type sugar transport systems, ATPase components {ECO:0000313|EMBL:AHL23738.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus nautili.;"
S_p1_S3_coassembly_k141_432691_23
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27404..29098
DNA (1695bp) protein (565aa)
Uncharacterized protein Tax=Brevibacillus borstelensis AK1 RepID=M8E547_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EMT54421.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
hypothetical protein
S_p1_S3_coassembly_k141_432691_24
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

comp(29054..30148)
DNA (1095bp) protein (365aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI000361AF67
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
S_p1_S3_coassembly_k141_432691_25
unknown

Not on your lists

comp(30145..30939)
DNA (795bp) protein (265aa)

This feature has no annotations

S_p1_S3_coassembly_k141_432691_26
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(30942..32294)
DNA (1353bp) protein (451aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
S_p1_S3_coassembly_k141_432691_27
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(32300..33238)
DNA (939bp) protein (313aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_66_18 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
S_p1_S3_coassembly_k141_432691_28
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33346..33690)
DNA (345bp) protein (115aa)
Transcriptional modulator of MazE/toxin, MazF Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VES3_9CYAN
transcriptional modulator of MazE/toxin, MazF
Tax=RBG_16_Deltaproteobacteria_47_11_curated
S_p1_S3_coassembly_k141_432691_29
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33696..33992)
DNA (297bp) protein (99aa)
hypothetical protein bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RBG_16_Deltaproteobacteria_47_11_curated
S_p1_S3_coassembly_k141_432691_30
unknown

Not on your lists

comp(34153..34764)
DNA (612bp) protein (204aa)

This feature has no annotations

Displaying items 1-30 of 90 in total

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