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S_p1_S3_coassembly_k141_748897

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_748897_1
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(175..1917)
DNA (1743bp) protein (581aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=CG_Elusi_04
S_p1_S3_coassembly_k141_748897_2
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

1952..2296
DNA (345bp) protein (115aa)
Preprotein translocase, SecG subunit bin=GWB2_Elusimicrobium_63_22 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
preprotein translocase subunit SecG
Tax=CG_Elusi_04
S_p1_S3_coassembly_k141_748897_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2297..2590)
DNA (294bp) protein (98aa)
protein of unknown function (DUF192)
hypothetical protein; K09005 hypothetical protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
S_p1_S3_coassembly_k141_748897_trna_5
unknown

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comp(2762..2835)
DNA (74bp)
transferRNA Cys
S_p1_S3_coassembly_k141_748897_trna_4
unknown

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comp(2928..3001)
DNA (74bp)
transferRNA Val
S_p1_S3_coassembly_k141_748897_trna_1
unknown

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3073..3143
DNA (71bp)
transferRNA Gly
S_p1_S3_coassembly_k141_748897_trna_2
unknown

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3178..3248
DNA (71bp)
transferRNA Gly
S_p1_S3_coassembly_k141_748897_trna_3
unknown

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3417..3498
DNA (82bp)
transferRNA Leu
S_p1_S3_coassembly_k141_748897_4
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

Not on your lists

3627..4061
DNA (435bp) protein (145aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_56_46 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
N-terminal methylation motif domain-containing protein
Tax=GWF2_Elusimicrobia_62_30_curated
S_p1_S3_coassembly_k141_748897_5
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4242..5792)
DNA (1551bp) protein (517aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CN82_DESK7
S_p1_S3_coassembly_k141_748897_6
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(5789..6667)
DNA (879bp) protein (293aa)
putative agmatinase; K01480 agmatinase [EC:3.5.3.11] bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
agmatinase
Tax=RBG_16_Planctomycetes_43_13_curated
S_p1_S3_coassembly_k141_748897_7
RIFOXYC2_FULL_PER-ii_58_32_curated, PER-ii, Bacteria

Not on your lists

comp(6748..7764)
DNA (1017bp) protein (339aa)
Deoxyhypusine synthase-like protein Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XTC3_DESMR
deoxyhypusine synthase-like protein
Tax=RIFOXYC2_FULL_PER-ii_58_32_curated
S_p1_S3_coassembly_k141_748897_8
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7787..8335)
DNA (549bp) protein (183aa)
arginine decarboxylase, pyruvoyl-dependent (EC:4.1.1.19)
Probable pyruvoyl-dependent arginine decarboxylase bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
S_p1_S3_coassembly_k141_748897_9
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

8551..9822
DNA (1272bp) protein (424aa)
Uncharacterized protein bin=GWA2_Elusi-like_A8_64_40 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
hypothetical protein
Tax=CG_Elusi_04
S_p1_S3_coassembly_k141_748897_10
GWB2_Elusimicrobia_63_22_curated, Elusimicrobia, Bacteria

Not on your lists

9854..10186
DNA (333bp) protein (111aa)
Putative uncharacterized protein bin=GWB2_Elusimicrobium_63_22 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
Tax=GWB2_Elusimicrobia_63_22_curated
S_p1_S3_coassembly_k141_748897_11
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

10253..11131
DNA (879bp) protein (293aa)
arginase; K01476 arginase [EC:3.5.3.1] bin=CNBR_ACIDO species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
arginase (EC:3.5.3.1)
Tax=RBG_16_RIF03_38_10_curated
S_p1_S3_coassembly_k141_748897_12
unknown

Not on your lists

11428..13323
DNA (1896bp) protein (632aa)

This feature has no annotations

S_p1_S3_coassembly_k141_748897_13
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

comp(13363..14427)
DNA (1065bp) protein (355aa)
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase bin=GWF2_OP3_43_52 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
S_p1_S3_coassembly_k141_748897_14
RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14489..15169)
DNA (681bp) protein (227aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000365C106
phosphoribosyltransferase
Tax=RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated
S_p1_S3_coassembly_k141_748897_15
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15213..20600)
DNA (5388bp) protein (1796aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=GWC2_Elusimicrobia_56_31_curated
S_p1_S3_coassembly_k141_748897_16
unknown

Not on your lists

20785..21876
DNA (1092bp) protein (364aa)

This feature has no annotations

S_p1_S3_coassembly_k141_748897_17
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21881..22987
DNA (1107bp) protein (369aa)
Permease YjgP/YjgQ family protein Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QG42_DESB2
YjgP/YjgQ family permease
Tax=RBG_16_Deltaproteobacteria_54_18_curated
S_p1_S3_coassembly_k141_748897_18
unknown

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comp(23087..24298)
DNA (1212bp) protein (404aa)

This feature has no annotations

S_p1_S3_coassembly_k141_748897_19
unknown

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comp(24529..25095)
DNA (567bp) protein (189aa)

This feature has no annotations

S_p1_S3_coassembly_k141_748897_20
unknown

Not on your lists

comp(25191..25823)
DNA (633bp) protein (211aa)

This feature has no annotations

S_p1_S3_coassembly_k141_748897_21
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(25963..27714)
DNA (1752bp) protein (584aa)
Acetoacetyl-CoA synthase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDP2_9CHLR
Acetoacetyl-CoA synthase {ECO:0000313|EMBL:EFH90174.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
acetoacetyl-CoA synthase
S_p1_S3_coassembly_k141_748897_22
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(27947..29200)
DNA (1254bp) protein (418aa)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Tax=RBG_13_WOR_2_41_10_curated
S_p1_S3_coassembly_k141_748897_23
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(29227..30432)
DNA (1206bp) protein (402aa)
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=GWA2_Elusimicrobia_69_24_curated
Displaying 28 items

View Taxonomy