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S_p1_S3_coassembly_k141_996464

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_996464_1
unknown

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2..124
DNA (123bp) protein (41aa)

This feature has no annotations

S_p1_S3_coassembly_k141_996464_2
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

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225..3764
DNA (3540bp) protein (1180aa)
Chromosome partition protein Smc Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H0P2_UNCTG
chromosome segregation protein SMC
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
S_p1_S3_coassembly_k141_996464_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3837..5069
DNA (1233bp) protein (411aa)
Cytochrome c assembly protein, ccda Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TB16_HELMI
Disulfide bond oxidoreductase D family protein
Disulfide bond oxidoreductase D family protein {ECO:0000313|EMBL:AIC15655.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
S_p1_S3_coassembly_k141_996464_4
CG_Elusi_05, Elusimicrobia, Bacteria

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5136..6236
DNA (1101bp) protein (367aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AUZ2_9CLOT
Tax=CG_Elusi_05
S_p1_S3_coassembly_k141_996464_5
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

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6249..6869
DNA (621bp) protein (207aa)
Multiple antibiotic resistance (MarC)-related protein bin=GWA2_Elusimicrobia_66_18 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
S_p1_S3_coassembly_k141_996464_6
unknown

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7013..7789
DNA (777bp) protein (259aa)

This feature has no annotations

S_p1_S3_coassembly_k141_996464_7
GWA2_Elusimicrobia_61_42_curated, Elusimicrobia, Bacteria

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comp(7848..9290)
DNA (1443bp) protein (481aa)
Putative uncharacterized protein bin=GWA2_Elusi_like_61_42 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
Tax=GWA2_Elusimicrobia_61_42_curated
S_p1_S3_coassembly_k141_996464_8
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9297..10175
DNA (879bp) protein (293aa)
riboflavin synthase alpha chain (EC:2.5.1.9)
riboflavin synthase subunit alpha Tax=Thermodesulfatator atlanticus RepID=UPI0003B4E6D2
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
S_p1_S3_coassembly_k141_996464_9
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

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10154..11407
DNA (1254bp) protein (418aa)
ribBA; riboflavin biosynthesis protein RibBA (EC:4.1.99.12 3.5.4.25)
Riboflavin biosynthesis protein RibBA Tax=uncultured candidate division OP1 bacterium RepID=H5SV88_9BACT
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
S_p1_S3_coassembly_k141_996464_10
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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11408..11902
DNA (495bp) protein (165aa)
6,7-dimethyl-8-ribityllumazine synthase bin=GWA2_Elusimicrobia_66_18 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
ribH; Riboflavin synthase beta-chain
Tax=GWA2_Elusimicrobia_69_24_curated
S_p1_S3_coassembly_k141_996464_11
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

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11971..12432
DNA (462bp) protein (154aa)
N utilization substance protein B homolog Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08UH8_STIAD
nusB; transcription antitermination factor NusB
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
S_p1_S3_coassembly_k141_996464_12
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

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12437..14443
DNA (2007bp) protein (669aa)
DNA ligase bin=GWB2_CP_45_9 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
DNA ligase (NAD+)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
S_p1_S3_coassembly_k141_996464_13
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

14433..14903
DNA (471bp) protein (157aa)
Regulatory protein RecX Tax=Caldanaerobacter subterraneus RepID=RECX_THETN
OraA; hypothetical protein
Regulatory protein RecX; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
S_p1_S3_coassembly_k141_996464_14
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

14890..16443
DNA (1554bp) protein (518aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=PUR9_PERMH
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S_p1_S3_coassembly_k141_996464_15
unknown

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comp(16450..17442)
DNA (993bp) protein (331aa)

This feature has no annotations

S_p1_S3_coassembly_k141_996464_16
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17526..20054)
DNA (2529bp) protein (843aa)
PREDICTED: puromycin-sensitive aminopeptidase-like Tax=Oryzias latipes RepID=UPI0002A4C1C4
peptidase M1 membrane alanine aminopeptidase
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S_p1_S3_coassembly_k141_996464_17
Persephonella marina, Persephonella, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(20051..20482)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QSZ2_PERMH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO04363.1}; species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Persephonella.;" source="Persephonella marina (strain DSM 14350 / EX-H1).;"
S_p1_S3_coassembly_k141_996464_18
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20509..21705)
DNA (1197bp) protein (399aa)
putative 2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
Putative 2-amino-3-ketobutyrate CoA ligase bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=GWC2_Elusimicrobia_65_9_curated
S_p1_S3_coassembly_k141_996464_19
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

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comp(21727..22782)
DNA (1056bp) protein (352aa)
Putative threonine dehydrogenase bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
putative threonine dehydrogenase
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p1_S3_coassembly_k141_996464_20
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(22785..23714)
DNA (930bp) protein (310aa)
Proline dehydrogenase Tax=uncultured candidate division OP1 bacterium RepID=H5SV36_9BACT
Proline dehydrogenase {ECO:0000313|EMBL:BAL59465.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
proline dehydrogenase
S_p1_S3_coassembly_k141_996464_21
unknown

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comp(23852..24421)
DNA (570bp) protein (190aa)

This feature has no annotations

Displaying 21 items

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