ggKbase home page

S_p1_S3_coassembly_k141_2030963

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2030963_1
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

Not on your lists

3..1685
DNA (1683bp) protein (561aa)
Putative membrane metal-binding protein bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
competence related membrane protein
Tax=GWC2_Elusimicrobia_64_44_curated
S_p1_S3_coassembly_k141_2030963_2
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

1642..2550
DNA (909bp) protein (303aa)
Probable inorganic polyphosphate/ATP-NAD kinase bin=GWA2_Elusimicrobia_66_18 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
putative inorganic polyphosphate/ATP-NAD kinase
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
S_p1_S3_coassembly_k141_2030963_3
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

2547..4283
DNA (1737bp) protein (579aa)
DNA repair protein RecN Tax=Treponema phagedenis F0421 RepID=E7NVX3_TREPH
recN; DNA repair protein RecN
Tax=RBG_13_Nitrospirae_41_22_curated
S_p1_S3_coassembly_k141_2030963_4
unknown

Not on your lists

4277..4771
DNA (495bp) protein (165aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2030963_5
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

4884..5258
DNA (375bp) protein (125aa)
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
S_p1_S3_coassembly_k141_2030963_6
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5277..7166)
DNA (1890bp) protein (630aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DC84_9BACT
N-acetylmuramoyl-L-alanine amidase
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
S_p1_S3_coassembly_k141_2030963_7
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

7246..9549
DNA (2304bp) protein (768aa)
Putative peptidoglycan glycosyltransferase bin=GWA2_Elusimicrobia_69_24 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
penicillin-binding protein 1B
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S_p1_S3_coassembly_k141_2030963_8
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9546..10874
DNA (1329bp) protein (443aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:CDX04979.1};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
enolase Tax=Desulfitobacterium sp. PCE1 RepID=UPI00037E269A
phosphopyruvate hydratase
S_p1_S3_coassembly_k141_2030963_9
unknown

Not on your lists

10855..11160
DNA (306bp) protein (102aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2030963_trna_2
unknown

Not on your lists

comp(11270..11352)
DNA (83bp)
transferRNA Leu
S_p1_S3_coassembly_k141_2030963_10
GWF2_Elusimicrobia_62_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11371..11994)
DNA (624bp) protein (208aa)
Uncharacterized protein bin=GWA2_Elusimicrobia_56_46 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=GWF2_Elusimicrobia_62_30_curated
S_p1_S3_coassembly_k141_2030963_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12887..13267)
DNA (381bp) protein (127aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
S_p1_S3_coassembly_k141_2030963_12
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13257..13553)
DNA (297bp) protein (99aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RBG_16_Elusimicrobia_66_12_curated
S_p1_S3_coassembly_k141_2030963_13
unknown

Not on your lists

comp(13913..14686)
DNA (774bp) protein (258aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2030963_trna_1
unknown

Not on your lists

14998..15069
DNA (72bp)
transferRNA Arg
S_p1_S3_coassembly_k141_2030963_14
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

15119..15553
DNA (435bp) protein (145aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQL7_KORVE
7-cyano-7-deazaguanine reductase
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
S_p1_S3_coassembly_k141_2030963_15
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

15550..16839
DNA (1290bp) protein (430aa)
L-lysine dehydrogenase bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
saccharopine dehydrogenase family protein
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S_p1_S3_coassembly_k141_2030963_16
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

16797..18371
DNA (1575bp) protein (525aa)
Aldehyde dehydrogenase bin=GWD2_Deltaproteobacteria_55_8 species=Pleurocapsa minor genus=Pleurocapsa taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
aldehyde dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S_p1_S3_coassembly_k141_2030963_17
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

18436..18753
DNA (318bp) protein (106aa)
hypothetical protein Tax=unclassified candidate division EM 19 RepID=UPI00036F0FE7
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
S_p1_S3_coassembly_k141_2030963_18
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

18755..20377
DNA (1623bp) protein (541aa)
Methylmalonyl-CoA mutase Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHE0_THEBM
methylmalonyl-CoA mutase
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
S_p1_S3_coassembly_k141_2030963_19
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

20494..22467
DNA (1974bp) protein (658aa)
Type IV-A pilus assembly ATPase PilB bin=GWA2_Elusimicrobia_66_18 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
pilB; protein PilB
Tax=GWC2_Elusimicrobia_65_9_curated
S_p1_S3_coassembly_k141_2030963_20
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

22498..23580
DNA (1083bp) protein (361aa)
Hamp domain/gaf domain/hd domain protein bin=GWA2_Elusimicrobia_69_24 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hamp domain/gaf domain/hd domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Displaying 22 items

View Taxonomy