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S_p1_S3_coassembly_k141_959410

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_959410_1
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(3..875)
DNA (873bp) protein (291aa)
Putative uncharacterized protein Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S673_METSF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC70337.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. (strain FS406-22).;"
S_p1_S3_coassembly_k141_959410_2
unknown

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comp(1069..1326)
DNA (258bp) protein (86aa)

This feature has no annotations

S_p1_S3_coassembly_k141_959410_3
AR10, Diapherotrites, DPANN, Archaea

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comp(1419..2141)
DNA (723bp) protein (241aa)
hypothetical protein
id=5240873 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_959410_4
AR10, Diapherotrites, DPANN, Archaea

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comp(2108..2803)
DNA (696bp) protein (232aa)
hypothetical protein
Nucleotide-diphospho-sugar transferases bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_959410_5

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2921..3607
DNA (687bp) protein (229aa)
hypothetical protein
hypothetical protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60602.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_959410_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3660..3989
DNA (330bp) protein (110aa)
transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] bin=bin9_gal15 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
4a-hydroxytetrahydrobiopterin dehydratase (EC:4.2.1.96)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
S_p1_S3_coassembly_k141_959410_7
Methanobrevibacter smithii, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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4003..4992
DNA (990bp) protein (330aa)
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter smithii DSM 2375.;"
tRNA pseudouridine synthase Pus10 Tax=Methanobrevibacter smithii RepID=B9AG03_METSM
hypothetical protein
S_p1_S3_coassembly_k141_959410_8
unknown

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comp(5010..5366)
DNA (357bp) protein (119aa)

This feature has no annotations

S_p1_S3_coassembly_k141_959410_9
Brachyspira hyodysenteriae, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

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5566..6552
DNA (987bp) protein (329aa)
SQS PSY, Squalene/phytoene synthase-like protein Tax=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) RepID=C0R0Y3_BRAHW
squalene/phytoene synthase-like protein
SQS PSY, Squalene/phytoene synthase-like protein {ECO:0000313|EMBL:ACN83771.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira hyodysenteriae (strain ATCC 49526 / WA1).;"
S_p1_S3_coassembly_k141_959410_10
Podospora anserina, Podospora, Sordariales, Sordariomycetidae, Ascomycota, Fungi

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6783..7682
DNA (900bp) protein (300aa)
Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 10 Tax=Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) RepID=B2APC0_PODAN
Podospora anserina S mat+ genomic DNA chromosome 5, supercontig 10 {ECO:0000313|EMBL:CAP65837.1}; Uncharacterized protein {ECO:0000313|EMBL:CDP30301.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Lasiosphaeriaceae; Podospora.;" source="Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383); (Pleurage anserina).;"
gIII; adsorption protein
S_p1_S3_coassembly_k141_959410_11

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7870..8622
DNA (753bp) protein (251aa)
hypothetical protein; K03644 lipoic acid synthetase [EC:2.8.1.8] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; species="Archaea.;" source="archaeon GW2011_AR10.;"
hypothetical protein
S_p1_S3_coassembly_k141_959410_12
unknown

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8626..8910
DNA (285bp) protein (95aa)

This feature has no annotations

S_p1_S3_coassembly_k141_959410_13

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8907..9995
DNA (1089bp) protein (363aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.4); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:AJF60304.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AJF60304.1};; EC=1.2.4.4 {ECO:0000313|EMBL:AJF60304.1};; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_959410_14
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9985..10962
DNA (978bp) protein (326aa)
pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1)
Pyruvate dehydrogenase (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_13_Deltaproteobacteria_47_9_curated
S_p1_S3_coassembly_k141_959410_15

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11023..12330
DNA (1308bp) protein (436aa)
pyruvate dehydrogenase E2 component dihydrolipoamide acetyltransferase (EC:2.3.1.12)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Pyruvate dehydrogenase E2 component dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:AJF60306.1}; EC=2.3.1.12 {ECO:0000313|EMBL:AJF60306.1};; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_959410_16
unknown

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comp(12388..12873)
DNA (486bp) protein (162aa)

This feature has no annotations

S_p1_S3_coassembly_k141_959410_17
unknown

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12972..13448
DNA (477bp) protein (159aa)

This feature has no annotations

S_p1_S3_coassembly_k141_959410_18
unknown

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13695..14075
DNA (381bp) protein (127aa)

This feature has no annotations

S_p1_S3_coassembly_k141_959410_19
unknown

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14152..14658
DNA (507bp) protein (169aa)

This feature has no annotations

S_p1_S3_coassembly_k141_959410_20
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

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14771..15856
DNA (1086bp) protein (362aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
tRNA-guanine transglycosylase (EC:2.4.2.29)
Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
S_p1_S3_coassembly_k141_959410_21

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15894..16196
DNA (303bp) protein (101aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000378D7E0
Marine sediment metagenome DNA, contig: S01H4_S04556 {ECO:0000313|EMBL:GAG94970.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S_p1_S3_coassembly_k141_959410_22
unknown

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16506..17069
DNA (564bp) protein (188aa)

This feature has no annotations

Displaying 22 items

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