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S_p1_S3_coassembly_k141_2027586

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2027586_1
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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1..2829
DNA (2829bp) protein (943aa)
pkd domain containing protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Micromonospora sp. genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
S_p1_S3_coassembly_k141_2027586_2

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3074..3301
DNA (228bp) protein (76aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
rpoH; DNA-directed RNA polymerase subunit H; K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_2027586_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3318..6299
DNA (2982bp) protein (994aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Euryarchaeota_68_12_curated
S_p1_S3_coassembly_k141_2027586_4

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6296..8110
DNA (1815bp) protein (605aa)
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_2027586_5
AR10, Diapherotrites, DPANN, Archaea

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8126..10738
DNA (2613bp) protein (871aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'; K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_2027586_6
AR10, Diapherotrites, DPANN, Archaea

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10735..11985
DNA (1251bp) protein (417aa)
rpoA2; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
rpoA2; DNA-directed RNA polymerase, subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_2027586_7
AR10, Diapherotrites, DPANN, Archaea

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12025..12336
DNA (312bp) protein (104aa)
large subunit ribosomal protein L30e
LSU ribosomal protein l30e; K02908 large subunit ribosomal protein L30e bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_2027586_8
AR10, Diapherotrites, DPANN, Archaea

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12368..12757
DNA (390bp) protein (130aa)
nusA; N utilization substance protein A
nusA; transcription elongation factor NusA-like protein; K02600 N utilization substance protein A bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_2027586_9
Caldivirga maquilingensis, Caldivirga, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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12975..14927
DNA (1953bp) protein (651aa)
Ribosomal protein S12/S23 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MB80_CALMQ
30S ribosomal protein S12
Ribosomal protein S12/S23 {ECO:0000313|EMBL:ABW01170.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Caldivirga.;" source="Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307; / IC-167).;"
S_p1_S3_coassembly_k141_2027586_10
AR10, Diapherotrites, DPANN, Archaea

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14930..15544
DNA (615bp) protein (205aa)
small subunit ribosomal protein S7
30S ribosomal protein S5e (S7p); K02992 small subunit ribosomal protein S7 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_2027586_11
AR10, Diapherotrites, DPANN, Archaea

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15601..17793
DNA (2193bp) protein (731aa)
fusA; elongation factor EF-2; K03234 elongation factor 2 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
fusA; elongation factor 2
Tax=AR10
S_p1_S3_coassembly_k141_2027586_12
unknown

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17790..17927
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 12 items

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