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S_p1_S3_coassembly_k141_1979759

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1979759_1
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(213..797)
DNA (585bp) protein (195aa)
Putative uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_1979759_2
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(803..2248)
DNA (1446bp) protein (482aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
glutamyl-tRNA(Gln) amidotransferase subunit A
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_1979759_3
R_OD1_Yanofskybacteria_43_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(2316..2621)
DNA (306bp) protein (102aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036E67FD
glutamyl-tRNA(Gln) amidotransferase subunit C
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_43_22_curated
S_p1_S3_coassembly_k141_1979759_4
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(3091..5142)
DNA (2052bp) protein (684aa)
DNA ligase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
ligA; DNA ligase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_1979759_5
R_OD1_Yanofskybacteria_43_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(5168..5581)
DNA (414bp) protein (138aa)
id=1968401 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_43_22_curated
S_p1_S3_coassembly_k141_1979759_6
R_OD1_Yanofskybacteria_42_49, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(5604..6134)
DNA (531bp) protein (177aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037A394B
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_42_49_curated
S_p1_S3_coassembly_k141_1979759_7
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(6143..6622)
DNA (480bp) protein (160aa)
id=1968403 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_1979759_8
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(6832..7377)
DNA (546bp) protein (182aa)
id=1968404 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_1979759_9
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(7479..7913)
DNA (435bp) protein (145aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_1979759_10
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(7879..8673)
DNA (795bp) protein (265aa)
pilD; type 4 prepilin-like proteins leader peptide-processing enzyme PilD (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme PilD bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_1979759_11
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(8755..9261)
DNA (507bp) protein (169aa)
Putative uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
putative General secretion pathway protein GspG
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_1979759_12
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(9449..10657)
DNA (1209bp) protein (403aa)
Type IV pilus inner membrane protein PilC bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Type II secretory pathway, component PulF
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_1979759_13
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(10717..11784)
DNA (1068bp) protein (356aa)
twitching motility protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
twitching motility protein PilT
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_1979759_14
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(11862..13619)
DNA (1758bp) protein (586aa)
Type IV-A pilus assembly ATPase PilB bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
secretion system protein E
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_1979759_15
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(13751..14029)
DNA (279bp) protein (93aa)
id=1968427 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_1979759_16
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(14106..14648)
DNA (543bp) protein (181aa)
id=1968428 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_1979759_17
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(14752..15306)
DNA (555bp) protein (185aa)
id=1968429 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_1979759_18
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(15536..16645)
DNA (1110bp) protein (370aa)
Putative type IV pilus assembly protein PilM bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
pilus assembly protein PilM
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_1979759_19
R_OD1_Yanofskybacteria_43_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

16686..17468
DNA (783bp) protein (261aa)
Phosphoribosyltransferase Tax=uncultured bacterium RepID=K2FS93_9BACT
phosphoribosyltransferase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_43_22_curated
S_p1_S3_coassembly_k141_1979759_20
unknown

Not on your lists

comp(17465..17920)
DNA (456bp) protein (152aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1979759_21
R_OD1_Yanofskybacteria_43_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

17956..18540
DNA (585bp) protein (195aa)
Uracil phosphoribosyltransferase bin=GWF2_TM6_28_16 species=GWF2_TM6_27_16 genus=GWF2_TM6_27_16 taxon_order=GWF2_TM6_27_16 taxon_class=GWF2_TM6_27_16 phylum=TM6 tax=GWF2_TM6_28_16 organism_group=TM6
uraP; uracil phosphoribosyltransferase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_43_22_curated
S_p1_S3_coassembly_k141_1979759_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

18646..20940
DNA (2295bp) protein (765aa)
ATPases with chaperone activity, ATP-binding subunit bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
chaperone activity ATPase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S_p1_S3_coassembly_k141_1979759_23
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

21015..22571
DNA (1557bp) protein (519aa)
Translation initiation factor IF-2 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
infB; translation initiation factor IF-2
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_1979759_24

Not on your lists

22612..23001
DNA (390bp) protein (130aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035C3635
Uncharacterized protein {ECO:0000313|EMBL:KKT90789.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_13.;"
hypothetical protein
S_p1_S3_coassembly_k141_1979759_trna_1
unknown

Not on your lists

23109..23181
DNA (73bp)
transferRNA Cys
S_p1_S3_coassembly_k141_1979759_25
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

23157..23486
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CIG3_9BACT
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_1979759_26
R_OD1_Yanofskybacteria_47_9b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

23483..23956
DNA (474bp) protein (158aa)
GCN5-related N-acetyltransferase Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG04_9EURY
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_47_9b_curated
S_p1_S3_coassembly_k141_1979759_27
RBG_16_CPR_42_10_curated, Bacteria

Not on your lists

23963..24769
DNA (807bp) protein (269aa)
Uncharacterized protein Tax=Vibrio nigripulchritudo RepID=U4JWZ9_9VIBR
hypothetical protein
Tax=RBG_16_CPR_42_10_curated
S_p1_S3_coassembly_k141_1979759_28
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

24770..25798
DNA (1029bp) protein (343aa)
spore coat protein Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039A8457
dTDP-glucose 4,6-dehydratase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_1979759_29
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

25862..26356
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CEJ2_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
Displaying items 1-30 of 31 in total

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