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S_p1_S3_coassembly_k141_1394931

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Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1394931_1
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..3269
DNA (3267bp) protein (1089aa)
Repeat-containing protein Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74BT1_GEOSL
Fibronectin {ECO:0000313|EMBL:KIE42013.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
repeat-containing protein
S_p1_S3_coassembly_k141_1394931_2
R_OD1_45_15, Parcubacteria, Bacteria

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comp(3317..4177)
DNA (861bp) protein (287aa)
folD; methylenetetrahydrofolate dehydrogenase; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1394931_3
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

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comp(4572..5822)
DNA (1251bp) protein (417aa)
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase (Fragment) Tax=uncultured bacterium RepID=K2B3M1_9BACT
Tax=GWA1_OD1_49_17_curated
S_p1_S3_coassembly_k141_1394931_trna_1
unknown

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5881..5951
DNA (71bp)
transferRNA His
S_p1_S3_coassembly_k141_1394931_4
R_OD1_45_15, Parcubacteria, Bacteria

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6707..8539
DNA (1833bp) protein (611aa)
ftsH; cell division protein FtsH; K03798 cell division protease FtsH [EC:3.4.24.-] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
cell division protein FtsH
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1394931_trna_2
unknown

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8576..8648
DNA (73bp)
transferRNA Ile
S_p1_S3_coassembly_k141_1394931_5
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Berkelbacteria, Bacteria

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8670..9122
DNA (453bp) protein (151aa)
hypothetical protein bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
acetyltransferase, GNAT family
Tax=RIFCSPLOWO2_01_FULL_Berkelbacteria_50_28_curated
S_p1_S3_coassembly_k141_1394931_6
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

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9129..9578
DNA (450bp) protein (150aa)
id=2032523 bin=GWD2_CPR2_39_7 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
S_p1_S3_coassembly_k141_1394931_7
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

10102..10533
DNA (432bp) protein (144aa)
Protein MraZ Tax=uncultured bacterium RepID=K1XU95_9BACT
protein mraZ
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1394931_8
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

10627..11580
DNA (954bp) protein (318aa)
Ribosomal RNA small subunit methyltransferase H Tax=uncultured bacterium RepID=K1YF63_9BACT
mraW; S-adenosyl-methyltransferase MraW
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1394931_9
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

11662..11979
DNA (318bp) protein (106aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1394931_10
R_OD1_56_20, Parcubacteria, Bacteria

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12018..13658
DNA (1641bp) protein (547aa)
ttr:Tter_1614 peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
S_p1_S3_coassembly_k141_1394931_11
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

13793..15076
DNA (1284bp) protein (428aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1394931_trna_3
unknown

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15159..15233
DNA (75bp)
transferRNA Glu
S_p1_S3_coassembly_k141_1394931_12
unknown

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15556..15783
DNA (228bp) protein (76aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1394931_13
GWA1_OD1_Jorgensenbacteria_54_12_curated, Jorgensenbacteria, Parcubacteria, Bacteria

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15884..16117
DNA (234bp) protein (78aa)
AbrB/MazE/MraZ-like bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=GWA1_OD1_Jorgensenbacteria_54_12_curated
S_p1_S3_coassembly_k141_1394931_14
R_OD1_Kaiserbacteria_59_21, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

16242..16508
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XQL7_9BACT
death-on-curing family protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_59_21_curated
S_p1_S3_coassembly_k141_1394931_15
R_OD1_Yanofskybacteria_43_10b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(17025..18845)
DNA (1821bp) protein (607aa)
cts:Ctha_0544 glucosamine--fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
glmS; glucosamine 6-phosphate synthetase
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_43_10b_curated
S_p1_S3_coassembly_k141_1394931_16
GWC1_OD1_50_9, Adlerbacteria, Parcubacteria, Bacteria

Not on your lists

19791..20909
DNA (1119bp) protein (373aa)
Succinyl-CoA synthetase subunit beta Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VYY2_9EURY
Succinyl-CoA synthetase, beta subunit {ECO:0000313|EMBL:KKW18809.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Adlerbacteria) bacterium GW2011_GWC1_50_9.;"
succinyl-CoA ligase (ADP-forming) subunit beta
S_p1_S3_coassembly_k141_1394931_17
GWA1_OD1_53_13_partial, Parcubacteria, Bacteria

Not on your lists

20990..21901
DNA (912bp) protein (304aa)
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA synthetase (ADP-forming) alpha subunit Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LD71_CHLTF
Succinyl-CoA synthetase (ADP-forming) alpha subunit {ECO:0000313|EMBL:KKW33024.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_53_13.;"
S_p1_S3_coassembly_k141_1394931_18
R_OD1_Nomurabacteria_36_29, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

22018..22743
DNA (726bp) protein (242aa)
Citryl-CoA lyase Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DWH2_SULAA
citrate synthase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_36_29_curated
S_p1_S3_coassembly_k141_1394931_19
R_OD1_Kaiserbacteria_55_20, Kaiserbacteria, Parcubacteria, Bacteria

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22841..23275
DNA (435bp) protein (145aa)
seg 81..96 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
streptothricin acetyltransferase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_55_20_curated
S_p1_S3_coassembly_k141_1394931_20
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists

23467..23748
DNA (282bp) protein (94aa)
transmembrane_regions bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
S_p1_S3_coassembly_k141_1394931_21

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23726..24091
DNA (366bp) protein (122aa)
Gas vesicle protein {ECO:0000313|EMBL:KKQ55077.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
transmembrane_regions bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
S_p1_S3_coassembly_k141_1394931_22
R_OD1_52_25, Parcubacteria, Bacteria

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24095..24883
DNA (789bp) protein (263aa)
Triosephosphate isomerase bin=GWC1_OD1_38_17 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
triosephosphate isomerase
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_1394931_23

Not on your lists

24888..27128
DNA (2241bp) protein (747aa)
Cell surface protein {ECO:0000313|EMBL:KKS82680.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC1_43_10.;"
hypothetical protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Methanosarcina mazei genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
S_p1_S3_coassembly_k141_1394931_24
RIFOXYB1_FULL_OD1_Wolfebacteria_54_12_curated, Wolfebacteria, Parcubacteria, Bacteria

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27100..27726
DNA (627bp) protein (209aa)
Tax=RIFOXYB1_FULL_OD1_Wolfebacteria_54_12_curated
S_p1_S3_coassembly_k141_1394931_25

Not on your lists

27832..28590
DNA (759bp) protein (253aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000371B1E2
26 kDa periplasmic immunogenic protein {ECO:0000313|EMBL:KKW16299.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_50_14.;"
membrane protein
S_p1_S3_coassembly_k141_1394931_26
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

28611..29258
DNA (648bp) protein (216aa)
glycosyl transferase family 2 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
GtrA family protein
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1394931_27
unknown

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comp(29371..29667)
DNA (297bp) protein (99aa)

This feature has no annotations

Displaying items 1-30 of 91 in total

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