ggKbase home page

S_p1_S3_coassembly_k141_1984516

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1984516_1
GWA2_OD1_42_32, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(105..1499)
DNA (1395bp) protein (465aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS54139.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_42_32.;"
S_p1_S3_coassembly_k141_1984516_2
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(1506..2102)
DNA (597bp) protein (199aa)
transmembrane_regions 62..84 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKR17468.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
S_p1_S3_coassembly_k141_1984516_3

Not on your lists

comp(2099..3220)
DNA (1122bp) protein (374aa)
Methylase N-4/N-6 domain protein {ECO:0000313|EMBL:KKS92725.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_13.;"
DNA methylase N-4/N-6 domain protein bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
DNA methylase N-4/N-6 domain-containing protein
S_p1_S3_coassembly_k141_1984516_4

Not on your lists

comp(3226..4017)
DNA (792bp) protein (264aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS96326.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13.;"
Putative type II restriction enzyme bin=GWA2_CPR4_42_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
putative type II restriction enzyme
S_p1_S3_coassembly_k141_1984516_5
GWA2_OP11_47_70_partial, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(4023..4235)
DNA (213bp) protein (71aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037089BB
Helix-turn-helix domain protein {ECO:0000313|EMBL:KKU79830.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_47_70.;"
helix-turn-helix domain-containing protein
S_p1_S3_coassembly_k141_1984516_6
unknown

Not on your lists

comp(4834..5046)
DNA (213bp) protein (71aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1984516_trna_1
unknown

Not on your lists

comp(4897..4967)
DNA (71bp)
transferRNA Gln
S_p1_S3_coassembly_k141_1984516_7
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

5135..6373
DNA (1239bp) protein (413aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YEC6_9BACT
type II secretion system protein E
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
S_p1_S3_coassembly_k141_1984516_8
R_OD1_57_28, Parcubacteria, Bacteria

Not on your lists

6366..7499
DNA (1134bp) protein (378aa)
type II secretion system F domain; K02653 type IV pilus assembly protein PilC bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
type II secretion system F domain
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
S_p1_S3_coassembly_k141_1984516_9
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

7539..7967
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2ELI9_9BACT
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_1984516_10
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

7990..9390
DNA (1401bp) protein (467aa)
LVIVD repeat protein bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
hypothetical protein
Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
S_p1_S3_coassembly_k141_1984516_11
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

9412..9963
DNA (552bp) protein (184aa)
transmembrane_regions 17..39 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_1984516_12
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

9965..10366
DNA (402bp) protein (134aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_1984516_13
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

10363..10827
DNA (465bp) protein (155aa)
hypothetical protein; K02650 type IV pilus assembly protein PilA bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_1984516_14
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

comp(10901..12013)
DNA (1113bp) protein (371aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XGU3_9BACT
DNA polymerase III subunit gamma and tau
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1984516_15
R_RIF_OD1_13_47_10, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

12112..12636
DNA (525bp) protein (175aa)
hypothetical protein bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_47_10_curated
S_p1_S3_coassembly_k141_1984516_16
R_RIF_OD1_13_49_12, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

12834..13445
DNA (612bp) protein (204aa)
Putative uncharacterized protein bin=GWA2_CPR4_42_17 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_49_12_curated
S_p1_S3_coassembly_k141_1984516_17
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

13491..14843
DNA (1353bp) protein (451aa)
Putative uncharacterized protein bin=GWA1_ZB2_49_26 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1984516_18
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

14844..15671
DNA (828bp) protein (276aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XV96_9BACT
chromosome segregation and condensation protein ScpA
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1984516_19
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

15658..16908
DNA (1251bp) protein (417aa)
DNA methylase N-4/N-6 domain protein Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LX33_TEPAE
DNA methylase N-4/N-6 domain protein
DNA methylase N-4/N-6 domain protein {ECO:0000313|EMBL:CDI40508.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
S_p1_S3_coassembly_k141_1984516_20
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16950..17564
DNA (615bp) protein (205aa)
hypothetical protein Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI000362A09C
Uncharacterized protein {ECO:0000313|EMBL:KKS04856.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
S_p1_S3_coassembly_k141_1984516_21
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

17586..18176
DNA (591bp) protein (197aa)
condensin subunit ScpB; K06024 segregation and condensation protein B bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
chromosome segregation and condensation protein ScpB
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1984516_22
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

18209..19324
DNA (1116bp) protein (372aa)
D-alanyl-D-alanine carboxypeptidase family protein; K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
D-alanyl-D-alanine carboxypeptidase-like protein
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
S_p1_S3_coassembly_k141_1984516_23
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

19321..20403
DNA (1083bp) protein (361aa)
phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
S_p1_S3_coassembly_k141_1984516_24
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

comp(20447..21514)
DNA (1068bp) protein (356aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI0003651528
F420-0:gamma-glutamyl ligase-like protein
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1984516_25
R_OD1_Kaiserbacteria_54_22, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

21599..21976
DNA (378bp) protein (126aa)
panD; aspartate 1-decarboxylase precursor (EC:4.1.1.11)
L-aspartate 1-decarboxylase Tax=Brevibacillus brevis RepID=UPI0003821FEF
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_22_curated
S_p1_S3_coassembly_k141_1984516_26
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

22162..22794
DNA (633bp) protein (211aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
S_p1_S3_coassembly_k141_1984516_27
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists


23000..24253
DNA (1254bp) protein (418aa)
Prolyl-tRNA synthetase bin=GWC2_OD1_43_27 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Prolyl-tRNA synthetase
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1984516_28
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

24306..25346
DNA (1041bp) protein (347aa)
mreB2; MreB bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
mreB2; MreB
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1984516_29
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

25350..26051
DNA (702bp) protein (234aa)
Cell shape-determining protein MreC bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
Displaying items 1-30 of 36 in total

View Taxonomy