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S_p1_S3_coassembly_k141_876402

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_876402_1
AR4, Woesearchaeaota, DPANN, Archaea

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comp(2..1294)
DNA (1293bp) protein (431aa)
PROKAR_LIPOPROTEIN bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
S_p1_S3_coassembly_k141_876402_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1431..4307)
DNA (2877bp) protein (959aa)
UPI0003D1A86A related cluster Tax=unknown RepID=UPI0003D1A86A
Ig family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S_p1_S3_coassembly_k141_876402_3
unknown

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comp(4347..6926)
DNA (2580bp) protein (860aa)

This feature has no annotations

S_p1_S3_coassembly_k141_876402_4
CG_Pacearch_04, Pacearchaeota, Archaea

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7063..8151
DNA (1089bp) protein (363aa)
geranylgeranyl reductase bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Geranylgeranyl reductase
Tax=CG_Pacearch_04
S_p1_S3_coassembly_k141_876402_5
unknown

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comp(8167..9096)
DNA (930bp) protein (310aa)

This feature has no annotations

S_p1_S3_coassembly_k141_876402_6
unknown

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9289..9861
DNA (573bp) protein (191aa)

This feature has no annotations

S_p1_S3_coassembly_k141_876402_7
unknown

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9947..11218
DNA (1272bp) protein (424aa)

This feature has no annotations

S_p1_S3_coassembly_k141_876402_8

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11244..14045
DNA (2802bp) protein (934aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D05C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62718.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_876402_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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14070..15188
DNA (1119bp) protein (373aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI00037FC4A0
glycosyltransferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ELZ30922.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
S_p1_S3_coassembly_k141_876402_10
BJP_08E140C01_Elusimicrobia_64_11, Elusimicrobia lineage IV, Elusimicrobia, Bacteria

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comp(15172..16203)
DNA (1032bp) protein (344aa)
Methyltransferase type 11 bin=GWA2_Elusimicrobia_66_18 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
type 11 methyltransferase
Tax=BJP_08E140C01_Elusimicrobia_64_11
S_p1_S3_coassembly_k141_876402_11
unknown

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16255..16953
DNA (699bp) protein (233aa)

This feature has no annotations

S_p1_S3_coassembly_k141_876402_12

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comp(16950..18068)
DNA (1119bp) protein (373aa)
Group 1 glycosyl transferase Tax=Pseudomonas psychrotolerans L19 RepID=H0JAJ6_9PSED
Uncharacterized protein {ECO:0000313|EMBL:CEG12373.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
S_p1_S3_coassembly_k141_876402_13
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

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comp(18106..18798)
DNA (693bp) protein (231aa)
Glycosyl transferase family 2 bin=GWA2_Elusimicrobia_56_46 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
family 2 glycosyl transferase
Tax=GWC2_Elusimicrobia_56_31_curated
S_p1_S3_coassembly_k141_876402_14

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comp(18822..20150)
DNA (1329bp) protein (443aa)
Lipopolysaccharide biosynthesis protein RfbH Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VRK5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKL76103.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative aminotransferase
S_p1_S3_coassembly_k141_876402_15
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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comp(20147..21121)
DNA (975bp) protein (325aa)
amr:AM1_2189 NAD-dependent epimerase/dehydratase; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45] bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
yfnG; sporulation NAD-dependent epimerase/dehydratase YfnG
Tax=RBG_13_Nitrospirae_39_12_curated
S_p1_S3_coassembly_k141_876402_16
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(21118..21906)
DNA (789bp) protein (263aa)
Glucose-1-phosphate cytidylyltransferase bin=GWA2_Deltaproteo_65_63 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
Nucleoside-diphosphate-sugar pyrophosphorylase family protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
S_p1_S3_coassembly_k141_876402_17
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21991..22959
DNA (969bp) protein (323aa)
Pyruvate dehydrogenase (Lipoamide) Tax=Beggiatoa sp. PS RepID=A7BPK6_9GAMM
Pyruvate dehydrogenase (Lipoamide) {ECO:0000313|EMBL:EDN71523.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
acetoin dehydrogenase (TPP-dependent) alpha chain
S_p1_S3_coassembly_k141_876402_18
Crocosphaera watsonii, Crocosphaera, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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22949..24037
DNA (1089bp) protein (363aa)
pyruvate dehydrogenase complex E1 component beta subunit (EC:1.2.4.1)
Acetoin dehydrogenase E1 component beta-subunit Tax=Crocosphaera watsonii WH 0401 RepID=T2J701_CROWT
Acetoin dehydrogenase E1 component beta-subunit {ECO:0000313|EMBL:CCQ61653.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Crocosphaera.;" source="Crocosphaera watsonii WH 0401.;"
S_p1_S3_coassembly_k141_876402_19
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(24021..25727)
DNA (1707bp) protein (569aa)
Putative uncharacterized protein Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J434_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99505.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
S_p1_S3_coassembly_k141_876402_20
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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comp(25759..27357)
DNA (1599bp) protein (533aa)
id=3789898 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=GWF2_Lentisphaerae_49_21_curated
S_p1_S3_coassembly_k141_876402_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

27419..28816
DNA (1398bp) protein (466aa)
amine oxidase
amine oxidase bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Displaying 21 items

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