ggKbase home page

S_p1_S3_coassembly_k141_1370464

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1370464_1
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2..217
DNA (216bp) protein (72aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003680DED
Tax=AR11
S_p1_S3_coassembly_k141_1370464_2
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

280..1272
DNA (993bp) protein (331aa)
putative nucleotide sugar epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
Tax=CG_Pacearch_02
S_p1_S3_coassembly_k141_1370464_3
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

1269..2276
DNA (1008bp) protein (336aa)
putative nucleotide sugar epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
Tax=CG_Pacearch_02
S_p1_S3_coassembly_k141_1370464_4
R_OD1_Wolfebacteria_42_16, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

2307..3191
DNA (885bp) protein (295aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Wolfebacteria_42_16_curated
S_p1_S3_coassembly_k141_1370464_5
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

3188..4126
DNA (939bp) protein (313aa)
Nucleoside-diphosphate-sugar epimerase bin=GWA1_Alphaproteobacteria_45_9 species=Magnetospirillum magneticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small
NAD-dependent epimerase/dehydratase
Tax=CG_Pacearch_02
S_p1_S3_coassembly_k141_1370464_6
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4119..4952
DNA (834bp) protein (278aa)
fabG4; 3-oxoacyl-[acyl-carrier protein] reductase FabG (EC:1.1.1.100)
short-chain dehydrogenase Tax=Burkholderia sp. WSM4176 RepID=UPI000373546F
Short-chain dehydrogenase {ECO:0000313|EMBL:KKB11045.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
S_p1_S3_coassembly_k141_1370464_7
unknown

Not on your lists

5028..5999
DNA (972bp) protein (324aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1370464_8
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5977..6597
DNA (621bp) protein (207aa)
Gll2778 protein bin=GWC2_Proteo_65_14_Ab886 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
glycosyl transferase
Tax=GWC2_Deltaproteobacteria_65_14_curated
S_p1_S3_coassembly_k141_1370464_9
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

6951..7316
DNA (366bp) protein (122aa)
Putative uncharacterized protein Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCR9_DICT6
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
Displaying 9 items

View Taxonomy