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S_p1_S3_coassembly_k141_1547123

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1547123_1
unknown

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1..78
DNA (78bp) protein (26aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1547123_2
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(290..607)
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AU38_9ARCH
hypothetical protein
Tax=CG_Micra_01
S_p1_S3_coassembly_k141_1547123_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

718..993
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUQ9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06250.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
S_p1_S3_coassembly_k141_1547123_4
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(1030..1953)
DNA (924bp) protein (308aa)
Uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1547123_5
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

2140..3903
DNA (1764bp) protein (588aa)
glucosamine/fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
Glucosamine/fructose-6-phosphate aminotransferase, glucosamine-fructose-6-phosphate aminotransferase (Isomerizing) {ECO:0000313|EMBL:KKR08917.1}; EC=2.6.1.16 {ECO:0000313|EMBL:KKR08917.1};; species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
glucosamine/fructose-6-phosphate aminotransferase
S_p1_S3_coassembly_k141_1547123_6
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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3905..5035
DNA (1131bp) protein (377aa)
Glucose-1-phosphate thymidylyltransferase Tax=planctomycete KSU-1 RepID=I3IGU3_9PLAN
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:GAB60938.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
Glucosamine-1-phosphate N-acetyltransferase
S_p1_S3_coassembly_k141_1547123_7
unknown

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5105..5506
DNA (402bp) protein (134aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1547123_8
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(5565..6080)
DNA (516bp) protein (172aa)
50S ribosomal protein L10e bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rpl10e; 50S ribosomal protein L10e
Tax=AR5
S_p1_S3_coassembly_k141_1547123_9

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comp(6128..6697)
DNA (570bp) protein (190aa)
Putative deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:CEG13618.1}; EC=3.5.4.13 {ECO:0000313|EMBL:CEG13618.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
dcd; deoxycytidine triphosphate deaminase Dcd (EC:3.5.4.13)
Probable deoxycytidine triphosphate deaminase Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E1U2_METRM
S_p1_S3_coassembly_k141_1547123_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6771..7841
DNA (1071bp) protein (357aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hemH; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
SAICAR synthetase Tax=Halobacterium sp. DL1 RepID=G4IEX0_9EURY
S_p1_S3_coassembly_k141_1547123_11
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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7843..9267
DNA (1425bp) protein (475aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase Tax=Planctomyces maris DSM 8797 RepID=A6C9A8_9PLAN
S_p1_S3_coassembly_k141_1547123_12
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(9270..10985)
DNA (1716bp) protein (572aa)
Thymidylate synthase Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QLY3_NOSS7
thymidylate synthase
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_1547123_13
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(11031..13472)
DNA (2442bp) protein (814aa)
SMC domain-containing protein; K03529 chromosome segregation protein bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Chromosome partition protein Smc
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_1547123_14

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13594..14343
DNA (750bp) protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55505.1}; species="Archaea.;" source="archaeon GW2011_AR19.;"
Uncharacterized membrane protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S_p1_S3_coassembly_k141_1547123_15
unknown

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14562..14837
DNA (276bp) protein (92aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1547123_16
AR5, Aenigmarchaeota, DPANN, Archaea

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15034..16248
DNA (1215bp) protein (405aa)
Geranylgeranyl reductase bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
geranylgeranyl reductase
Tax=AR5
S_p1_S3_coassembly_k141_1547123_17
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

Not on your lists

16279..16737
DNA (459bp) protein (153aa)
acetyltransferase bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
S_p1_S3_coassembly_k141_1547123_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17180..18040)
DNA (861bp) protein (287aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Shikimate dehydrogenase Tax=Sorangium cellulosum (strain So ce56) RepID=A9FDV0_SORC5
aroE1; hypothetical protein
S_p1_S3_coassembly_k141_1547123_19
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18082..18861)
DNA (780bp) protein (260aa)
5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
Purine nucleoside phosphorylase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMK0_NITGG
Tax=RBG_16_Bathyarchaeota_57_9_curated
S_p1_S3_coassembly_k141_1547123_20
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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18946..19719
DNA (774bp) protein (258aa)
hypothetical protein; K06870 uncharacterized protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_1547123_21

Not on your lists

19716..20225
DNA (510bp) protein (170aa)
Marine sediment metagenome DNA, contig: S06H3_L01008 {ECO:0000313|EMBL:GAI16587.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein; K08999 hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
S_p1_S3_coassembly_k141_1547123_22
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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20266..21006
DNA (741bp) protein (247aa)
Hydrolase, TatD family Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYL3_METFV
hydrolase, tatd family
Hydrolase, TatD family {ECO:0000313|EMBL:ADP77395.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
S_p1_S3_coassembly_k141_1547123_23
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(21043..21789)
DNA (747bp) protein (249aa)
DNA polymerase sliding clamp; K04802 proliferating cell nuclear antigen bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA polymerase sliding clamp
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_1547123_24
Thermococcus kodakarensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(21806..22120)
DNA (315bp) protein (105aa)
Replication factor A complex, RPA14 subunit Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JDN2_THEKO
replication factor A complex, RPA14 subunit
Replication factor A complex, RPA14 subunit {ECO:0000313|EMBL:BAD86149.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1); (Pyrococcus kodakaraensis (strain KOD1)).;"
S_p1_S3_coassembly_k141_1547123_25
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


22184..23482
DNA (1299bp) protein (433aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
aspartyl-tRNA synthetase
Tax=AR5
S_p1_S3_coassembly_k141_1547123_26
unknown

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23479..23856
DNA (378bp) protein (126aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1547123_27
unknown

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23932..24561
DNA (630bp) protein (210aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1547123_28
unknown

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24565..25041
DNA (477bp) protein (159aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1547123_29
unknown

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25138..25638
DNA (501bp) protein (167aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1547123_30
unknown

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25642..26736
DNA (1095bp) protein (365aa)

This feature has no annotations

Displaying items 1-30 of 44 in total

View Taxonomy