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S_p1_S3_coassembly_k141_812432

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_812432_1
AR5, Aenigmarchaeota, DPANN, Archaea

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170..727
DNA (558bp) protein (186aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR5
S_p1_S3_coassembly_k141_812432_2
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(920..1405)
DNA (486bp) protein (162aa)
Histidine triad (HIT) protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RWJ9_FERPA
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ADC64862.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
S_p1_S3_coassembly_k141_812432_trna_2
unknown

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comp(1564..1635)
DNA (72bp)
transferRNA Ala
S_p1_S3_coassembly_k141_812432_trna_1
unknown

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1702..1813
DNA (112bp)
transferRNA Ile
S_p1_S3_coassembly_k141_812432_3
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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1821..2102
DNA (282bp) protein (94aa)
Phage integrase family protein Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TUF6_9ARCH
Phage integrase family protein {ECO:0000313|EMBL:EMR73546.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
integrase family protein
S_p1_S3_coassembly_k141_812432_4
unknown

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comp(2202..2375)
DNA (174bp) protein (58aa)

This feature has no annotations

S_p1_S3_coassembly_k141_812432_5
unknown

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2521..2712
DNA (192bp) protein (64aa)

This feature has no annotations

S_p1_S3_coassembly_k141_812432_6
unknown

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3537..3803
DNA (267bp) protein (89aa)

This feature has no annotations

S_p1_S3_coassembly_k141_812432_7
unknown

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3845..4099
DNA (255bp) protein (85aa)

This feature has no annotations

S_p1_S3_coassembly_k141_812432_8
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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4096..4503
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FSM4_METHJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD41860.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
S_p1_S3_coassembly_k141_812432_9
unknown

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4500..4667
DNA (168bp) protein (56aa)

This feature has no annotations

S_p1_S3_coassembly_k141_812432_10
unknown

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comp(4648..4908)
DNA (261bp) protein (87aa)

This feature has no annotations

S_p1_S3_coassembly_k141_812432_11
unknown

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comp(4953..5243)
DNA (291bp) protein (97aa)

This feature has no annotations

S_p1_S3_coassembly_k141_812432_12

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5436..6356
DNA (921bp) protein (307aa)
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L3P bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rpl3p; 50S ribosomal protein L3P
S_p1_S3_coassembly_k141_812432_13

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6489..7262
DNA (774bp) protein (258aa)
50S ribosomal protein L4P bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L4P {ECO:0000313|EMBL:AJS11792.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L4
S_p1_S3_coassembly_k141_812432_14

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7259..7636
DNA (378bp) protein (126aa)
hypothetical protein bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; species="Archaea.;" source="archaeon GW2011_AR5.;"
50S ribosomal protein L23
S_p1_S3_coassembly_k141_812432_15

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7652..8554
DNA (903bp) protein (301aa)
50S ribosomal protein L2P bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L2P {ECO:0000313|EMBL:AJS11793.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L2
S_p1_S3_coassembly_k141_812432_16

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8557..8940
DNA (384bp) protein (128aa)
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
rps19p; 30S ribosomal protein S19
S_p1_S3_coassembly_k141_812432_17
unknown

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8940..9158
DNA (219bp) protein (73aa)

This feature has no annotations

S_p1_S3_coassembly_k141_812432_18

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9183..9656
DNA (474bp) protein (158aa)
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L22P bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
S_p1_S3_coassembly_k141_812432_19

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9653..10345
DNA (693bp) protein (231aa)
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps3p; 30S ribosomal protein S3P
S_p1_S3_coassembly_k141_812432_20
AR5, Aenigmarchaeota, DPANN, Archaea

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10345..10545
DNA (201bp) protein (67aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rpl29p; 50S ribosomal protein L29P
Tax=AR5
S_p1_S3_coassembly_k141_812432_21
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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10548..10847
DNA (300bp) protein (100aa)
Protein translation factor SUI1 homolog bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
translation initiation factor 1 (eif-1/sui1)
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
S_p1_S3_coassembly_k141_812432_22
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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10911..11186
DNA (276bp) protein (92aa)
Ribonuclease P protein component 1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BI78_9EURY
ribonuclease P protein subunit Rpp29
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_812432_23

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11180..11506
DNA (327bp) protein (109aa)
archaeal ribosomal protein S17P bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
30S ribosomal protein S17P {ECO:0000313|EMBL:AJS12229.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps17p; 30S ribosomal protein S17
S_p1_S3_coassembly_k141_812432_24

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11503..11904
DNA (402bp) protein (134aa)
50S ribosomal protein L14P bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14P
S_p1_S3_coassembly_k141_812432_25

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11981..12355
DNA (375bp) protein (125aa)
50S ribosomal protein L24P bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L24P
S_p1_S3_coassembly_k141_812432_26
Methanobacterium sp. MB1, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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12352..13026
DNA (675bp) protein (225aa)
30S ribosomal protein S4e Tax=Methanobacterium sp. MB1 RepID=U6EDM5_9EURY
rps4e; 30S ribosomal protein S4e
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485, ECO:0000313|EMBL:CDG64884.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium sp. MB1.;"
S_p1_S3_coassembly_k141_812432_27

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13131..13622
DNA (492bp) protein (164aa)
50S ribosomal protein L5P {ECO:0000313|EMBL:AJS12117.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rpl5p; 50S ribosomal protein L5
S_p1_S3_coassembly_k141_812432_28

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13939..14325
DNA (387bp) protein (129aa)
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
30S ribosomal protein S15Ae (S8p)
Displaying 30 items

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