ggKbase home page

S_p1_S3_coassembly_k141_1579149

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1579149_1
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(138..2246)
DNA (2109bp) protein (703aa)
cytoplasmic protein bin=GWC2_NOV_55_46 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_1579149_2
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(2243..2866)
DNA (624bp) protein (208aa)
Uncharacterized protein Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH1_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_1579149_3
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(2863..4104)
DNA (1242bp) protein (414aa)
Glycosyltransferase involved in cell wall biogenesis Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGH0_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Glycosyltransferase involved in cell wall biogenesis
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_1579149_4

Not on your lists

comp(4101..5438)
DNA (1338bp) protein (446aa)
Marine sediment metagenome DNA, contig: S01H1_L00843 {ECO:0000313|EMBL:GAF70981.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_1579149_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(5435..6886)
DNA (1452bp) protein (484aa)
Uncharacterized protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1579149_6
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


7112..7708
DNA (597bp) protein (199aa)
30S ribosomal protein S2 {ECO:0000313|EMBL:KKR78533.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
30S ribosomal protein S2 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S2
S_p1_S3_coassembly_k141_1579149_7
R_OD1_Nomurabacteria_37_25, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7713..8774)
DNA (1062bp) protein (354aa)
agmatinase Tax=Bacteria RepID=UPI0003667834
agmatinase
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_37_25_curated
S_p1_S3_coassembly_k141_1579149_8

Not on your lists

comp(8774..9712)
DNA (939bp) protein (313aa)
DNA repair and recombination protein RadB Tax=nanoarchaeote Nst1 RepID=R1G2W9_9ARCH
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; species="Archaea.;" source="archaeon GW2011_AR16.;"
DNA repair and recombination protein radB
S_p1_S3_coassembly_k141_1579149_9

Not on your lists

comp(9663..10040)
DNA (378bp) protein (126aa)
Marine sediment metagenome DNA, contig: S01H1_L00584 {ECO:0000313|EMBL:GAF84963.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S_p1_S3_coassembly_k141_1579149_10
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10184..11242)
DNA (1059bp) protein (353aa)
DNA repair and recombination protein RadA; K04483 DNA repair protein RadA bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA repair and recombination protein RadA
Tax=AR4
S_p1_S3_coassembly_k141_1579149_11
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11297..11818)
DNA (522bp) protein (174aa)
id=5800291 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
S_p1_S3_coassembly_k141_1579149_12
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11758..12213)
DNA (456bp) protein (152aa)
hypothetical protein; K07038 inner membrane protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
S_p1_S3_coassembly_k141_1579149_13
unknown

Not on your lists

comp(12241..12453)
DNA (213bp) protein (71aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1579149_trna_1
unknown

Not on your lists

12351..12423
DNA (73bp)
transferRNA Val
S_p1_S3_coassembly_k141_1579149_14
unknown

Not on your lists

comp(12450..12977)
DNA (528bp) protein (176aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1579149_15
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

13032..14174
DNA (1143bp) protein (381aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus islandicus (strain L.D.8.5 / Lassen #2).;"
Tryptophan--tRNA ligase Tax=Sulfolobus islandicus RepID=C3MQW3_SULIL
S_p1_S3_coassembly_k141_1579149_16
unknown

Not on your lists

14217..14960
DNA (744bp) protein (248aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1579149_17

Not on your lists


14992..16434
DNA (1443bp) protein (481aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; species="Archaea.;" source="archaeon GW2011_AR15.;"
Bifunctional aminoacyl-tRNA synthetase (Fragment) bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Proline-tRNA ligase
S_p1_S3_coassembly_k141_1579149_18
unknown

Not on your lists

comp(16400..17011)
DNA (612bp) protein (204aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1579149_19
unknown

Not on your lists

comp(16999..17988)
DNA (990bp) protein (330aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1579149_20
GWF2_TM6_28_16, TM6, Bacteria

Not on your lists

comp(17972..18502)
DNA (531bp) protein (177aa)
ATPase-like protein bin=GWF2_TM6_28_16 species=GWF2_TM6_27_16 genus=GWF2_TM6_27_16 taxon_order=GWF2_TM6_27_16 taxon_class=GWF2_TM6_27_16 phylum=TM6 tax=GWF2_TM6_28_16 organism_group=TM6
ATPase-like protein {ECO:0000313|EMBL:KKP24192.1}; species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_28_16.;"
hypothetical protein
S_p1_S3_coassembly_k141_1579149_21

Not on your lists

18570..19400
DNA (831bp) protein (277aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50208.1}; species="Archaea.;" source="archaeon GW2011_AR9.;"
S_p1_S3_coassembly_k141_1579149_22
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

19595..20236
DNA (642bp) protein (214aa)
proteasome subunit beta; K03433 proteasome beta subunit [EC:3.4.25.1] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Proteasome subunit beta
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_1579149_23
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

20293..22182
DNA (1890bp) protein (630aa)
KH-domain/beta-lactamase-domain protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
kh-domain/beta-lactamase-domain-containing protein
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_1579149_24
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

22257..22763
DNA (507bp) protein (169aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_1579149_25
unknown

Not on your lists

22763..23368
DNA (606bp) protein (202aa)

This feature has no annotations

Displaying 26 items

View Taxonomy