ggKbase home page

S_p1_S3_coassembly_k141_924343

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_924343_1
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

2..436
DNA (435bp) protein (145aa)
SMC domain protein; K03546 exonuclease SbcC bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKR16978.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
sbcC; putative nuclease SbcCD subunit C
S_p1_S3_coassembly_k141_924343_2
unknown

Not on your lists

comp(433..1047)
DNA (615bp) protein (205aa)

This feature has no annotations

S_p1_S3_coassembly_k141_924343_3
R_OP11_Daviesbacteria_36_13, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

1115..1375
DNA (261bp) protein (87aa)
hypothetical protein bin=bin1_lowGC species=Methanoplanus limicola genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_36_13_curated
S_p1_S3_coassembly_k141_924343_4
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

1376..1600
DNA (225bp) protein (75aa)
YcfA family protein bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
YcfA family protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_924343_5
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(1663..1935)
DNA (273bp) protein (91aa)
Predicted protein Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHQ9_9FIRM bin=ACD12 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
transcriptional regulator, XRE family
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
S_p1_S3_coassembly_k141_924343_6
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(1962..2297)
DNA (336bp) protein (112aa)
hypothetical protein bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
S_p1_S3_coassembly_k141_924343_7
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

2408..2653
DNA (246bp) protein (82aa)
transmembrane_regions 5..27 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
S_p1_S3_coassembly_k141_924343_8
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(2604..2966)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG07_RHOMR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S_p1_S3_coassembly_k141_924343_9
R_OP11_Daviesbacteria_36_13, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(2967..3197)
DNA (231bp) protein (77aa)
protein of unknown function DUF433 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_36_13_curated
S_p1_S3_coassembly_k141_924343_10
GWB1_OP11_43_14, Woesebacteria, Microgenomates, Bacteria

Not on your lists

3486..4655
DNA (1170bp) protein (390aa)
Fibronectin, type III domain protein {ECO:0000313|EMBL:KKS98044.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_43_14.;"
S_p1_S3_coassembly_k141_924343_11
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

4890..5309
DNA (420bp) protein (140aa)
hypothetical protein bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S_p1_S3_coassembly_k141_924343_12
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

5311..5550
DNA (240bp) protein (80aa)
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S_p1_S3_coassembly_k141_924343_13
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

5513..5956
DNA (444bp) protein (148aa)
Toxin-antitoxin system toxin component, PIN family Tax=Leptospira terpstrae serovar Hualin str. LT 11-33 = ATCC 700639 RepID=N1VK05_9LEPT
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S_p1_S3_coassembly_k141_924343_14
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(5997..7424)
DNA (1428bp) protein (476aa)
glycogen/starch synthase; K00703 starch synthase [EC:2.4.1.21] bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
glgA; glycogen synthase (EC:2.4.1.21)
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S_p1_S3_coassembly_k141_924343_15
R_OP11_Levybacteria_37_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(7438..8595)
DNA (1158bp) protein (386aa)
Glycosyl transferase group 1 bin=GWE2_CPR3_35_7 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
group 1 glycosyl transferase
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_10_curated
S_p1_S3_coassembly_k141_924343_16
R_OP11_Levybacteria_36_8b, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(8592..9662)
DNA (1071bp) protein (357aa)
glycosyl transferase bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
glycosyltransferase
Tax=RIFCSPLOWO2_02_FULL_OP11_Levybacteria_36_8b_curated
S_p1_S3_coassembly_k141_924343_17
GWB1_OP11_41_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(9672..10892)
DNA (1221bp) protein (407aa)
Glycosyl transferase group 1 {ECO:0000313|EMBL:KKS11159.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_41_5.;"
glycosyl transferase group 1 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
glycosyl transferase group 1
S_p1_S3_coassembly_k141_924343_18
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(10922..11731)
DNA (810bp) protein (270aa)
polysaccharide pyruvyl transferase csab (EC:2.4.1.187)
Teichoic acid biosynthesis proteins bin=GWE2_CPR3_35_7 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S_p1_S3_coassembly_k141_924343_19
R_OP11_Levybacteria_41_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(12012..13031)
DNA (1020bp) protein (340aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00037E6380
rod shape-determining protein MreB
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_41_15_curated
S_p1_S3_coassembly_k141_924343_20
R_OP11_Levybacteria_37_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

13442..14644
DNA (1203bp) protein (401aa)
seg 5..24 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
PEGA protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_10_curated
S_p1_S3_coassembly_k141_924343_21
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

14926..19122
DNA (4197bp) protein (1399aa)
Cell wall surface anchor family protein Tax=Streptococcus sanguinis SK1 RepID=F2BJA8_STRSA
Cadherin-like domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
Displaying 21 items

View Taxonomy