ggKbase home page

S_p1_S3_coassembly_k141_1271967

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1271967_1
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

1..1056
DNA (1056bp) protein (352aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2AAD6_9BACT
rod shape-determining protein MreB
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
S_p1_S3_coassembly_k141_1271967_2

Not on your lists

1081..1887
DNA (807bp) protein (269aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI0003741D99
Cell shape-determining protein MreC {ECO:0000313|EMBL:EKD86618.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
mreC; rod shape-determining protein MreC
S_p1_S3_coassembly_k141_1271967_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

1884..2303
DNA (420bp) protein (140aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI0003809127
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
S_p1_S3_coassembly_k141_1271967_4
R_OP11_Levybacteria_40_58, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(2293..2790)
DNA (498bp) protein (166aa)
id=5084433 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_58_curated
S_p1_S3_coassembly_k141_1271967_5
RBG_13_OP11_Gottesmanbacteria_37_7_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(2865..3530)
DNA (666bp) protein (222aa)
transmembrane_regions 210..232 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_13_OP11_Gottesmanbacteria_37_7_curated
S_p1_S3_coassembly_k141_1271967_6
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(3683..4030)
DNA (348bp) protein (116aa)
transmembrane_regions 13..35 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
S_p1_S3_coassembly_k141_1271967_7
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(4159..4653)
DNA (495bp) protein (165aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00037DA8A4
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S_p1_S3_coassembly_k141_1271967_8
RBG_13_OP11_Gottesmanbacteria_37_7_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(4653..6620)
DNA (1968bp) protein (656aa)
id=5084437 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Tax=RBG_13_OP11_Gottesmanbacteria_37_7_curated
S_p1_S3_coassembly_k141_1271967_9
RBG_13_OP11_Gottesmanbacteria_37_7_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(6610..7089)
DNA (480bp) protein (160aa)
transmembrane_regions 15..34 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_13_OP11_Gottesmanbacteria_37_7_curated
S_p1_S3_coassembly_k141_1271967_10
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(7086..8138)
DNA (1053bp) protein (351aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2AS13_9BACT
type IV pilin
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
S_p1_S3_coassembly_k141_1271967_11
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(8135..9820)
DNA (1686bp) protein (562aa)
Type II secretion system protein E Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT43_9BACT bin=ACD50 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Type II secretion system protein E
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
S_p1_S3_coassembly_k141_1271967_12
GWB1_OP11_37_8, Levybacteria, Microgenomates, Bacteria

Not on your lists

9958..10740
DNA (783bp) protein (261aa)
Transcriptional regulator, PaaX family {ECO:0000313|EMBL:KKQ41648.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_37_8.;"
PaaX family transcriptional regulator; K02616 phenylacetic acid degradation operon negative regulatory protein bin=GWC1_OP11_49_16_COMPLETE species=Sulfolobus islandicus genus=Sulfolobus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
PaaX family transcriptional regulator
S_p1_S3_coassembly_k141_1271967_13
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

10733..11890
DNA (1158bp) protein (386aa)
DNA protecting protein DprA; K04096 DNA processing protein bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
transcriptional regulator, MarR family
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
S_p1_S3_coassembly_k141_1271967_14
R_OP11_Roizmanbacteria_38_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(11862..13256)
DNA (1395bp) protein (465aa)
Putative glycoside hydrolase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZ86_CALAS
putative glycoside hydrolase
Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_38_11_curated
S_p1_S3_coassembly_k141_1271967_15
RBG_16_OP11_Levybacteria_35_6_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

13417..15471
DNA (2055bp) protein (685aa)
ckr:CKR_1310 DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA topoisomerase I, bacterial
Tax=RBG_16_OP11_Levybacteria_35_6_curated
S_p1_S3_coassembly_k141_1271967_16
GWC1_OP11_42_9, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(15468..16451)
DNA (984bp) protein (328aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS78168.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC1_42_9.;"
S_p1_S3_coassembly_k141_1271967_17
R_OP11_Levybacteria_40_58, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(16481..16783)
DNA (303bp) protein (101aa)
Putative uncharacterized protein Tax=uncultured archaeon GZfos14B8 RepID=Q64E56_9ARCH bin=RAAC39 species=uncultured archaeon GZfos14B8 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_58_curated
S_p1_S3_coassembly_k141_1271967_18

Not on your lists

comp(16847..17074)
DNA (228bp) protein (76aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XCY4_9BACT
Marine sediment metagenome DNA, contig: S06H3_C02106 {ECO:0000313|EMBL:GAH89941.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S_p1_S3_coassembly_k141_1271967_19
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(17220..18035)
DNA (816bp) protein (272aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI0003642A23
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
S_p1_S3_coassembly_k141_1271967_20
RBG_16_OP11_44_10_curated, Microgenomates, Bacteria

Not on your lists

18222..18515
DNA (294bp) protein (98aa)
hypothetical protein bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RBG_16_OP11_44_10_curated
S_p1_S3_coassembly_k141_1271967_21
RHI_OP11_Levybacteria_38_12, Levybacteria, Microgenomates, Bacteria

Not on your lists

18548..18847
DNA (300bp) protein (100aa)
Tax=RIFCSPHIGHO2_12_FULL_OP11_Levybacteria_38_12_curated
S_p1_S3_coassembly_k141_1271967_22
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(18893..19804)
DNA (912bp) protein (304aa)
transmembrane_regions 4..26 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Beta-lactamase class A
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S_p1_S3_coassembly_k141_1271967_23
GWB1_OP11_37_8, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(19835..20434)
DNA (600bp) protein (200aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00035EF67C
Uncharacterized protein {ECO:0000313|EMBL:KKQ41642.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_37_8.;"
hypothetical protein
S_p1_S3_coassembly_k141_1271967_24
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

20458..21375
DNA (918bp) protein (306aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2ACL6_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S_p1_S3_coassembly_k141_1271967_25
GWB1_OP11_37_8, Levybacteria, Microgenomates, Bacteria

Not on your lists

21427..21945
DNA (519bp) protein (173aa)
tRNA/rRNA methyltransferase Tax=uncultured bacterium RepID=K2C2B6_9BACT
tRNA/rRNA methyltransferase {ECO:0000313|EMBL:KKQ41639.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_37_8.;"
tRNA/rRNA methyltransferase SpoU
S_p1_S3_coassembly_k141_1271967_26
RHI_OP11_Daviesbacteria_43_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

21977..22942
DNA (966bp) protein (322aa)
Putative uncharacterized protein Tax=Dictyostelium discoideum RepID=Q54WQ8_DICDI
putative peptidoglycan binding protein
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_43_11_curated
Displaying 26 items

View Taxonomy