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S_p1_S3_coassembly_k141_15919

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_15919_1
R_RIF_OD1_09_51_10, RIF-OD1-9, Parcubacteria, Bacteria

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104..1297
DNA (1194bp) protein (398aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
Putative uncharacterized protein bin=GWF2_Planctomycete_41_51 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_51_10_curated
S_p1_S3_coassembly_k141_15919_2
unknown

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1345..1542
DNA (198bp) protein (66aa)

This feature has no annotations

S_p1_S3_coassembly_k141_15919_3
R_OP11_Woesebacteria_39_13, Woesebacteria, Microgenomates, Bacteria

Not on your lists

1639..2856
DNA (1218bp) protein (406aa)
lip:LI0331 amyA; alpha-amylase; K07405 alpha-amylase [EC:3.2.1.1] bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Woesebacteria_39_13_curated
S_p1_S3_coassembly_k141_15919_4
unknown

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2843..3172
DNA (330bp) protein (110aa)

This feature has no annotations

S_p1_S3_coassembly_k141_15919_5
R_RIF_OD1_09_51_10, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

3165..5174
DNA (2010bp) protein (670aa)
Glucoamylase Tax=uncultured bacterium RepID=K2B0W2_9BACT
glycoside hydrolase
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_51_10_curated
S_p1_S3_coassembly_k141_15919_6
R_OD1_Campbellbacteria_34_15, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

5179..6432
DNA (1254bp) protein (418aa)
queuine tRNA-ribosyltransferase (TGT); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
tgt; tRNA-guanine transglycosylase (EC:2.4.2.29)
Tax=RIFCSPLOWO2_01_FULL_OD1_Campbellbacteria_34_15_curated
S_p1_S3_coassembly_k141_15919_7
GWF2_OD1_52_12, Parcubacteria, Bacteria

Not on your lists

6495..8510
DNA (2016bp) protein (672aa)
UvrABC system protein B {ECO:0000313|EMBL:KKW26008.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_52_12.;"
UvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B bin=OD1_GWC2_34_28 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
excinuclease ABC subunit B
S_p1_S3_coassembly_k141_15919_8
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(8629..9213)
DNA (585bp) protein (195aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003644974
Uncharacterized protein {ECO:0000313|EMBL:KKT20673.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
PaaX family transcrtiptional regulator
S_p1_S3_coassembly_k141_15919_9
R_RIF_OD1_11_46_22b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

9406..11934
DNA (2529bp) protein (843aa)
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
uvrA; excinuclease ABC subunit A
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_46_22b_curated
S_p1_S3_coassembly_k141_15919_10
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

11912..13138
DNA (1227bp) protein (409aa)
Excinuclease ABC, C subunit domain protein {ECO:0000313|EMBL:KKW12542.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
excinuclease ABC subunit C ; K03703 excinuclease ABC subunit C bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
endonuclease
S_p1_S3_coassembly_k141_15919_11
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

13215..14297
DNA (1083bp) protein (361aa)
Sensor protein resE {ECO:0000313|EMBL:KKW12541.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
Two-component sensor kinase bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
S_p1_S3_coassembly_k141_15919_12
RIFOXYD1_FULL_OD1_44_32_curated, Parcubacteria, Bacteria

Not on your lists

14332..14712
DNA (381bp) protein (127aa)
Two-component sensor kinase bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFOXYD1_FULL_OD1_44_32_curated
S_p1_S3_coassembly_k141_15919_13
RIFOXYD1_FULL_OD1_46_19_curated, Parcubacteria, Bacteria

Not on your lists

14720..15688
DNA (969bp) protein (323aa)
D-alanine/D-alanine ligase (EC:6.3.2.4)
D-alanine-D-alanine ligase Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYC7_9BACT
Tax=RIFOXYD1_FULL_OD1_46_19_curated
S_p1_S3_coassembly_k141_15919_trna_1
unknown

Not on your lists

15797..15868
DNA (72bp)
transferRNA Ala
S_p1_S3_coassembly_k141_15919_14
unknown

Not on your lists

comp(15850..16122)
DNA (273bp) protein (91aa)

This feature has no annotations

S_p1_S3_coassembly_k141_15919_trna_5
unknown

Not on your lists

comp(16045..16115)
DNA (71bp)
transferRNA Ala
S_p1_S3_coassembly_k141_15919_trna_2
unknown

Not on your lists

16364..16435
DNA (72bp)
transferRNA Val
S_p1_S3_coassembly_k141_15919_trna_3
unknown

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16441..16512
DNA (72bp)
transferRNA Pro
S_p1_S3_coassembly_k141_15919_trna_4
unknown

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16536..16607
DNA (72bp)
transferRNA Ala
S_p1_S3_coassembly_k141_15919_15
RLO_OD1_60_15, Parcubacteria, Bacteria

Not on your lists


comp(16608..17780)
DNA (1173bp) protein (391aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003827B7C
phenylalanyl-tRNA synthetase alpha chain
Tax=RIFCSPLOWO2_12_FULL_OD1_60_15_curated
S_p1_S3_coassembly_k141_15919_16
GWA1_OD1_51_14_curated, Parcubacteria, Bacteria

Not on your lists

17884..18120
DNA (237bp) protein (79aa)
Tax=GWA1_OD1_51_14_curated
Displaying 21 items

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