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S_p1_S3_coassembly_k141_736694

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Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_736694_1
RIFOXYD1_FULL_OD1_46_19_curated, Parcubacteria, Bacteria

Not on your lists


comp(2..304)
DNA (303bp) protein (101aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
50S ribosomal protein L5
Tax=RIFOXYD1_FULL_OD1_46_19_curated
S_p1_S3_coassembly_k141_736694_2
R_OD1_Yanofskybacteria_41_29, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


comp(301..645)
DNA (345bp) protein (115aa)
50S ribosomal protein L24 bin=GWA1_ZB2_49_26 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
LSU ribosomal protein L24P
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_29_curated
S_p1_S3_coassembly_k141_736694_3
GWA1_OD1_51_14_curated, Parcubacteria, Bacteria

Not on your lists


comp(648..1019)
DNA (372bp) protein (124aa)
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L14
Tax=GWA1_OD1_51_14_curated
S_p1_S3_coassembly_k141_736694_4
R_OD1_Kaiserbacteria_51_21, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists


comp(1016..1243)
DNA (228bp) protein (76aa)
30S ribosomal protein S17 Tax=Thermodesulfatator atlanticus RepID=UPI0003B68C35
30S ribosomal protein S17
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_51_21_curated
S_p1_S3_coassembly_k141_736694_5
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists


comp(1240..1617)
DNA (378bp) protein (126aa)
50S ribosomal protein L16 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI000382AC3E
50S ribosomal protein L16
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
S_p1_S3_coassembly_k141_736694_6
GWA1_OD1_51_14_curated, Parcubacteria, Bacteria

Not on your lists


comp(1661..2314)
DNA (654bp) protein (218aa)
30S ribosomal protein S3 Tax=uncultured organism RepID=U3GQU4_9ZZZZ
rpsC; 30S ribosomal protein S3
Tax=GWA1_OD1_51_14_curated
S_p1_S3_coassembly_k141_736694_7

Not on your lists


comp(2322..2651)
DNA (330bp) protein (110aa)
50S ribosomal protein L22 {ECO:0000313|EMBL:KKW33910.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_53_43.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 bin=OD1_GWC2_34_28 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L22
S_p1_S3_coassembly_k141_736694_8
Parcubacteria bacterium GW2011_GWB1_42_9, Parcubacteria, Bacteria

Not on your lists


comp(2648..3022)
DNA (375bp) protein (125aa)
30S ribosomal protein S19 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZF6_9BACT
Ribosomal protein S19 {ECO:0000313|EMBL:KKS77369.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_9.;"
30S ribosomal protein S19
S_p1_S3_coassembly_k141_736694_9
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(3128..5197)
DNA (2070bp) protein (690aa)
transmembrane_regions bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
SpoIID/LytB domain-containing protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
S_p1_S3_coassembly_k141_736694_10
R_RIF_OD1_11_45_35, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5314..5613)
DNA (300bp) protein (100aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_45_35_curated
S_p1_S3_coassembly_k141_736694_11
RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(5690..6520)
DNA (831bp) protein (277aa)
Translation protein SH3-like bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplB; 50S ribosomal protein L2
Tax=RIFOXYB1_FULL_OD1_Nomurabacteria_39_16_curated
S_p1_S3_coassembly_k141_736694_12
GWC2_OD1_48_17, Parcubacteria, Bacteria

Not on your lists


comp(6523..6804)
DNA (282bp) protein (94aa)
50S ribosomal protein L23 {ECO:0000313|EMBL:KKU96355.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_48_17.;"
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplW; 50S ribosomal protein L23
S_p1_S3_coassembly_k141_736694_13
RIFOXYD1_FULL_OD1_44_32_curated, Parcubacteria, Bacteria

Not on your lists


comp(6791..7450)
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY28_9BACT
50S ribosomal protein L4
Tax=RIFOXYD1_FULL_OD1_44_32_curated
S_p1_S3_coassembly_k141_736694_14
GWA2_OD1_42_18, Parcubacteria, Bacteria

Not on your lists


comp(7440..7844)
DNA (405bp) protein (135aa)
50S ribosomal protein L3 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWS8_9BACT
50S ribosomal protein L3 {ECO:0000313|EMBL:KKS44971.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_18.;"
rplC; 50S ribosomal protein L3
S_p1_S3_coassembly_k141_736694_15
GWA1_OD1_51_14_curated, Parcubacteria, Bacteria

Not on your lists


comp(7865..8239)
DNA (375bp) protein (125aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsJ; 30S ribosomal protein S10
Tax=GWA1_OD1_51_14_curated
S_p1_S3_coassembly_k141_736694_16
R_OD1_Kaiserbacteria_51_21, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8246..9439)
DNA (1194bp) protein (398aa)
Elongation factor Tu bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
tufA; elongation factor Tu
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_51_21_curated
S_p1_S3_coassembly_k141_736694_17
unknown

Not on your lists

comp(9534..9719)
DNA (186bp) protein (62aa)

This feature has no annotations

S_p1_S3_coassembly_k141_736694_18
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9751..9921
DNA (171bp) protein (57aa)
Tax=RBG_13_Pacearchaeota_33_26_curated
S_p1_S3_coassembly_k141_736694_19
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(9947..12076)
DNA (2130bp) protein (710aa)
Elongation factor G bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
translation elongation factor G
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
S_p1_S3_coassembly_k141_736694_20
RIFOXYD1_FULL_OD1_44_32_curated, Parcubacteria, Bacteria

Not on your lists


comp(12086..12595)
DNA (510bp) protein (170aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S7
Tax=RIFOXYD1_FULL_OD1_44_32_curated
S_p1_S3_coassembly_k141_736694_21

Not on your lists


comp(12609..13025)
DNA (417bp) protein (139aa)
30S ribosomal protein S12 {ECO:0000313|EMBL:KKT09430.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_43_21.;"
30S ribosomal protein S12 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rpsL; 30S ribosomal protein S12
S_p1_S3_coassembly_k141_736694_22
unknown

Not on your lists

comp(13158..13364)
DNA (207bp) protein (69aa)

This feature has no annotations

S_p1_S3_coassembly_k141_736694_23
GWA1_OD1_44_13, Parcubacteria, Bacteria

Not on your lists

comp(13546..14163)
DNA (618bp) protein (206aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361D698
Transposase {ECO:0000313|EMBL:KKT37624.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
hypothetical protein
S_p1_S3_coassembly_k141_736694_24
R_RIF_OD1_09_41_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(14260..14871)
DNA (612bp) protein (204aa)
peptidase M50 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_41_20_curated
S_p1_S3_coassembly_k141_736694_25
R_RIF_OD1_11_45_15b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(15220..15924)
DNA (705bp) protein (235aa)
hypothetical protein bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_11_45_15b_curated
S_p1_S3_coassembly_k141_736694_26
RIFOXYD2_FULL_OD1_52_8_curated, Parcubacteria, Bacteria

Not on your lists

comp(16378..17076)
DNA (699bp) protein (233aa)
Tax=RIFOXYD2_FULL_OD1_52_8_curated
S_p1_S3_coassembly_k141_736694_27
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists

comp(17104..17973)
DNA (870bp) protein (290aa)
Beta-lactamase domain protein {ECO:0000313|EMBL:KKR53632.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_40_21.;"
DNA internalization-like competence protein ComEC/Rec2; K02238 competence protein ComEC bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
beta-lactamase domain-containing protein
S_p1_S3_coassembly_k141_736694_28

Not on your lists

comp(17986..18714)
DNA (729bp) protein (243aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30); K01996 branched-chain amino acid transport system ATP-binding protein bin=OD1_GWC2_34_28 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:KKT46053.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
ABC transporter
S_p1_S3_coassembly_k141_736694_29
RIFOXYD1_FULL_OD1_46_19_curated, Parcubacteria, Bacteria

Not on your lists

comp(18711..19448)
DNA (738bp) protein (246aa)
ABC transporter-like protein bin=OD1_GWC2_34_28 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-)
Tax=RIFOXYD1_FULL_OD1_46_19_curated
S_p1_S3_coassembly_k141_736694_30
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(19491..20345)
DNA (855bp) protein (285aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
amino acid ABC transporter
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
Displaying items 1-30 of 75 in total

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