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S_p1_S3_coassembly_k141_1354689

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1354689_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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269..1471
DNA (1203bp) protein (401aa)
Uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=Thermococcus sp. CL1 genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
S_p1_S3_coassembly_k141_1354689_2
AR10, Diapherotrites, DPANN, Archaea

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comp(1586..2647)
DNA (1062bp) protein (354aa)
glycosyltransferase
glycosyltransferase bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_1354689_3
AR10, Diapherotrites, DPANN, Archaea

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comp(2644..3459)
DNA (816bp) protein (272aa)
hypothetical protein
coiled-coil bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_1354689_4

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3501..4316
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZYH7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD54657.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
conserved protein of unknown function
S_p1_S3_coassembly_k141_1354689_5

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4373..4705
DNA (333bp) protein (111aa)
id=5048700 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45363.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
S_p1_S3_coassembly_k141_1354689_6
unknown

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comp(4698..4844)
DNA (147bp) protein (49aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1354689_7
unknown

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comp(4792..4974)
DNA (183bp) protein (61aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1354689_8
unknown

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5348..6169
DNA (822bp) protein (274aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1354689_9
AR10, Diapherotrites, DPANN, Archaea

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6190..9171
DNA (2982bp) protein (994aa)
chromosome segregation protein
chromosome segregation protein SMC; K03529 chromosome segregation protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_1354689_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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9199..10287
DNA (1089bp) protein (363aa)
thrC-2; L-threonine synthase (EC:4.2.3.1)
Threonine synthase Tax=uncultured archaeon GZfos1D1 RepID=Q64CL8_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
S_p1_S3_coassembly_k141_1354689_11
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

10404..10736
DNA (333bp) protein (111aa)
id=5048700 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_1354689_12
unknown

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comp(10727..10867)
DNA (141bp) protein (47aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1354689_13
unknown

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comp(10806..10964)
DNA (159bp) protein (53aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1354689_14
AR10, Diapherotrites, DPANN, Archaea

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comp(10910..13240)
DNA (2331bp) protein (777aa)
hypothetical protein
ATP-dependent protease; K06870 uncharacterized protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_1354689_15

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comp(13398..13697)
DNA (300bp) protein (100aa)
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; species="Archaea.;" source="archaeon GW2011_AR11.;"
50S ribosomal protein L12P, large subunit ribosomal protein L12
rpl12p; 50S ribosomal protein L12P; K02869 large subunit ribosomal protein L12 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S_p1_S3_coassembly_k141_1354689_16

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comp(13739..14569)
DNA (831bp) protein (277aa)
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; species="Archaea.;" source="archaeon GW2011_AR21.;"
rplP0; large subunit ribosomal protein L10
rplP0; acidic ribosomal protein P0; K02864 large subunit ribosomal protein L10 bin=GW2011_AR10_complete species=Methanocaldococcus villosus genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S_p1_S3_coassembly_k141_1354689_17

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comp(14566..15294)
DNA (729bp) protein (243aa)
rpl1P; large subunit ribosomal protein L1
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:AJF59996.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_1354689_18
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15395..16414)
DNA (1020bp) protein (340aa)
Nucleoside-diphosphate-sugar epimerase Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SCP0_HAHCH
nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ABC31584.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
S_p1_S3_coassembly_k141_1354689_19
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

16478..16759
DNA (282bp) protein (94aa)
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
S_p1_S3_coassembly_k141_1354689_20
unknown

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16767..16907
DNA (141bp) protein (47aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1354689_21
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16900..17232)
DNA (333bp) protein (111aa)
id=5048700 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_1354689_22
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


comp(17387..17857)
DNA (471bp) protein (157aa)
50S ribosomal protein L17, large subunit ribosomal protein L11
rpl11p; 50S ribosomal protein L17; K02867 large subunit ribosomal protein L11 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_1354689_23

Not on your lists


comp(17879..18319)
DNA (441bp) protein (147aa)
transcriptional antiterminator NusG
NusG antitermination factor; K02601 transcriptional antiterminator NusG bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_1354689_24

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comp(18448..18822)
DNA (375bp) protein (125aa)
Protein translocase subunit SecE Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXB2_METFV
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; species="Archaea.;" source="archaeon GW2011_AR21.;"
secE; protein transport protein Ssubunit gamma-related protein
S_p1_S3_coassembly_k141_1354689_25

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comp(18863..19975)
DNA (1113bp) protein (371aa)
cell division protein FtsZ, cell division protein FtsZ
FtsZ_1; cell division protein FtsZ; K03531 cell division protein FtsZ bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_1354689_26
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


comp(20111..20947)
DNA (837bp) protein (279aa)
ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase (EC:2.1.1.182)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_1354689_27
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(20944..21720)
DNA (777bp) protein (259aa)
hypothetical protein
hypothetical protein; K07572 putative nucleotide binding protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_1354689_28

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comp(21791..22138)
DNA (348bp) protein (116aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:KHO55807.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO55807.1};; species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
S_p1_S3_coassembly_k141_1354689_29

Not on your lists


comp(22177..22512)
DNA (336bp) protein (112aa)
50S ribosomal protein L21e Tax=Uncultured methanogenic archaeon RC-I RepID=RL21_UNCMA
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; species="Archaea.;" source="archaeon GW2011_AR21.;"
rpl21e; 50S ribosomal protein L21e
S_p1_S3_coassembly_k141_1354689_30
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

22697..23290
DNA (594bp) protein (198aa)
transcription initiation factor TFIID TATA-box-binding protein
transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
Displaying items 1-30 of 120 in total

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