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S_p1_S3_coassembly_k141_656262

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_656262_1
AR20, Woesearchaeaota, DPANN, Archaea

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comp(52..807)
DNA (756bp) protein (252aa)
hypothetical protein
id=5103101 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
S_p1_S3_coassembly_k141_656262_2

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1004..1552
DNA (549bp) protein (183aa)
pyruvoyl-dependent arginine decarboxylase (EC:4.1.1.19)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YMH4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD26584.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S_p1_S3_coassembly_k141_656262_3
unknown

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1664..2347
DNA (684bp) protein (228aa)

This feature has no annotations

S_p1_S3_coassembly_k141_656262_4
R_RIF_OD1_03_45_10, RIF-OD1-3, Parcubacteria, Bacteria

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comp(2398..4866)
DNA (2469bp) protein (823aa)
Cu2+-exporting ATPase (EC:3.6.3.4)
Heavy-metal transporting P-type ATPase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_45_10_curated
S_p1_S3_coassembly_k141_656262_5
AR10, Diapherotrites, DPANN, Archaea

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5179..5577
DNA (399bp) protein (133aa)
PadR-like protein family transcriptional regulator
PadR-like family transcriptional regulator bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_656262_6

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5618..6226
DNA (609bp) protein (203aa)
regulatory protein ArsR
regulatory protein ArsR bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Regulatory protein ArsR {ECO:0000313|EMBL:AJF60721.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_656262_7
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6223..6486)
DNA (264bp) protein (88aa)
Addiction module antitoxin Tax=Methanolobus psychrophilus R15 RepID=K4MSB8_9EURY
addiction module antitoxin
Addiction module antitoxin {ECO:0000313|EMBL:AFV24656.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psychrophilus R15.;"
S_p1_S3_coassembly_k141_656262_8
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(6489..6710)
DNA (222bp) protein (74aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003738516
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX01269.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus maripaludis (strain C6 / ATCC BAA-1332).;"
S_p1_S3_coassembly_k141_656262_9
AR17, Woesearchaeaota, DPANN, Archaea

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6920..8248
DNA (1329bp) protein (443aa)
Tax=AR17
S_p1_S3_coassembly_k141_656262_10
unknown

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comp(8259..8420)
DNA (162bp) protein (54aa)

This feature has no annotations

S_p1_S3_coassembly_k141_656262_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(8489..14167)
DNA (5679bp) protein (1893aa)
PREDICTED: short stature homeobox protein 2 isoform 2 Tax=Orcinus orca RepID=UPI0002BCE7DC
putative xylanase/chitin deacetylase
Tax=RBG_16_Euryarchaeota_41_19_curated
S_p1_S3_coassembly_k141_656262_12
AR17, Woesearchaeaota, DPANN, Archaea

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comp(14164..14685)
DNA (522bp) protein (174aa)
id=3832835 bin=PER_GWC2_41_7 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR17
S_p1_S3_coassembly_k141_656262_13
unknown

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14813..15145
DNA (333bp) protein (111aa)

This feature has no annotations

S_p1_S3_coassembly_k141_656262_14
unknown

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comp(15180..15398)
DNA (219bp) protein (73aa)

This feature has no annotations

S_p1_S3_coassembly_k141_656262_15
unknown

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comp(15504..15737)
DNA (234bp) protein (78aa)

This feature has no annotations

S_p1_S3_coassembly_k141_656262_16

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comp(15780..20525)
DNA (4746bp) protein (1582aa)
Marine sediment metagenome DNA, contig: S01H1_S33701 {ECO:0000313|EMBL:GAG36895.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_656262_17
unknown

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21018..21338
DNA (321bp) protein (107aa)

This feature has no annotations

S_p1_S3_coassembly_k141_656262_18
unknown

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21367..21759
DNA (393bp) protein (131aa)

This feature has no annotations

S_p1_S3_coassembly_k141_656262_19
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

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21763..22224
DNA (462bp) protein (154aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
lipoprotein signal peptidase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
S_p1_S3_coassembly_k141_656262_20

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22248..22757
DNA (510bp) protein (170aa)
Hit-like protein; K02503 Hit-like protein involved in cell-cycle regulation bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Hit-like protein involved in cell-cycle regulation {ECO:0000313|EMBL:KHO46464.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical)
S_p1_S3_coassembly_k141_656262_21
CG_Woesearch_01, Woesearchaeota, Archaea

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22754..23281
DNA (528bp) protein (176aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_656262_22
AR18, Woesearchaeaota, DPANN, Archaea

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comp(23282..25951)
DNA (2670bp) protein (890aa)
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Leucine-tRNA ligase
Tax=AR18
Displaying 22 items

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