ggKbase home page

S_p1_S3_coassembly_k141_1261273

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1261273_1
unknown

Not on your lists

608..1375
DNA (768bp) protein (256aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1261273_2
unknown

Not on your lists

1365..2177
DNA (813bp) protein (271aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1261273_3
unknown

Not on your lists

comp(2326..4509)
DNA (2184bp) protein (728aa)
nitric oxide reductase activation protein
S_p1_S3_coassembly_k141_1261273_4
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4514..5386)
DNA (873bp) protein (291aa)
ATPase family protein associated with various cellular activities (AAA) Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWY8_METHD
ATPase family protein associated with various cellular activities (AAA)
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
S_p1_S3_coassembly_k141_1261273_5
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5535..5876)
DNA (342bp) protein (114aa)
Transcription regulator AbrB/SpoV, predicted bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
S_p1_S3_coassembly_k141_1261273_6
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5873..6178)
DNA (306bp) protein (102aa)
id=5041829 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
S_p1_S3_coassembly_k141_1261273_7
unknown

Not on your lists

comp(6166..6357)
DNA (192bp) protein (64aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1261273_8

Not on your lists

comp(6362..7066)
DNA (705bp) protein (235aa)
hypothetical protein; K06869 uncharacterized protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47897.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
S_p1_S3_coassembly_k141_1261273_9
unknown

Not on your lists

comp(7093..8370)
DNA (1278bp) protein (426aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1261273_10
unknown

Not on your lists

8460..9482
DNA (1023bp) protein (341aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1261273_11
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

9541..9978
DNA (438bp) protein (146aa)
hypothetical protein
id=5103206 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
S_p1_S3_coassembly_k141_1261273_12
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(10029..11237)
DNA (1209bp) protein (403aa)
Uncharacterized protein Tax=Ferroplasma sp. Type II RepID=T0LYC7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB72892.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
hypothetical protein
S_p1_S3_coassembly_k141_1261273_13
unknown

Not on your lists

11479..12099
DNA (621bp) protein (207aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1261273_14
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

12229..12612
DNA (384bp) protein (128aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365E5D7
rps8E; 30S ribosomal protein S8e
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus DSM 8774.;"
S_p1_S3_coassembly_k141_1261273_trna_3
unknown

Not on your lists

comp(12665..12739)
DNA (75bp)
transferRNA Glu
S_p1_S3_coassembly_k141_1261273_trna_2
unknown

Not on your lists

comp(12777..12882)
DNA (106bp)
transferRNA Ile
S_p1_S3_coassembly_k141_1261273_15

Not on your lists


comp(12942..13208)
DNA (267bp) protein (89aa)
50S ribosomal protein L35; K02917 large subunit ribosomal protein L35Ae bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L35Ae {ECO:0000313|EMBL:KHO45703.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L35Ae
S_p1_S3_coassembly_k141_1261273_16

Not on your lists

comp(13251..13505)
DNA (255bp) protein (85aa)
Addiction module toxin, RelE/StbE family Tax=Thermoplasmatales archaeon A-plasma RepID=T0LVN9_9EURY
RelE protein {ECO:0000313|EMBL:KHO51702.1}; species="Archaea.;" source="archaeon GW2011_AR17.;"
RelE protein
S_p1_S3_coassembly_k141_1261273_17
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(13505..13723)
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TZ66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMR75071.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
hypothetical protein
S_p1_S3_coassembly_k141_1261273_18
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

13804..14418
DNA (615bp) protein (205aa)
Base excision DNA repair protein, HhH-GPD family Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IE81_ACIB4 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Base excision DNA repair protein, HhH-GPD family
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
S_p1_S3_coassembly_k141_1261273_19
unknown

Not on your lists

comp(14415..15284)
DNA (870bp) protein (290aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1261273_20
unknown

Not on your lists

15470..15622
DNA (153bp) protein (51aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1261273_trna_1
unknown

Not on your lists

15650..15720
DNA (71bp)
transferRNA Gly
S_p1_S3_coassembly_k141_1261273_21

Not on your lists


comp(15825..16817)
DNA (993bp) protein (331aa)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein KAE1 homolog bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative tRNA threonylcarbamoyladenosine biosynthesis protein KAE1-like protein {ECO:0000313|EMBL:AJF61976.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
metallohydrolase, glycoprotease/Kae1 family
S_p1_S3_coassembly_k141_1261273_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16888..17301)
DNA (414bp) protein (138aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000377C38B
hypothetical protein
Tax=AR11
S_p1_S3_coassembly_k141_1261273_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


17416..17706
DNA (291bp) protein (97aa)
LSU ribosomal protein L21E bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L21e
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1261273_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

17706..18050
DNA (345bp) protein (115aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E07C5
hypothetical protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1261273_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

18108..18689
DNA (582bp) protein (194aa)
hypothetical protein; K07572 putative nucleotide binding protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-binding protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1261273_26
unknown

Not on your lists

comp(18872..19000)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 29 items

View Taxonomy