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S_p1_S3_coassembly_k141_2416595

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2416595_1

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comp(381..2132)
DNA (1752bp) protein (584aa)
Probable translation initiation factor IF-2 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; species="Archaea.;" source="archaeon GW2011_AR15.;"
translation initiation factor eaif-5b
S_p1_S3_coassembly_k141_2416595_2
unknown

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2219..2491
DNA (273bp) protein (91aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2416595_3
unknown

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comp(2514..2948)
DNA (435bp) protein (145aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2416595_4
unknown

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comp(3001..3447)
DNA (447bp) protein (149aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2416595_5
unknown

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comp(3423..3725)
DNA (303bp) protein (101aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2416595_6
unknown

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comp(3722..4138)
DNA (417bp) protein (139aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2416595_7
unknown

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4434..4871
DNA (438bp) protein (146aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2416595_8
CG_Woesearch_03, Woesearchaeota, Archaea

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4985..5872
DNA (888bp) protein (296aa)
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_2416595_9
CG_Woesearch_02, Woesearchaeota, Archaea

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6012..8495
DNA (2484bp) protein (828aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
alaS; alanine--tRNA ligase/alanyl-tRNA synthetase (EC:6.1.1.7)
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_2416595_10
unknown

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8492..8995
DNA (504bp) protein (168aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2416595_11
unknown

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comp(9081..9269)
DNA (189bp) protein (63aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2416595_12
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(9266..9985)
DNA (720bp) protein (240aa)
Tax=CG_Pacearch_04
S_p1_S3_coassembly_k141_2416595_13
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9988..11172)
DNA (1185bp) protein (395aa)
Uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_2416595_14
unknown

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comp(11318..11566)
DNA (249bp) protein (83aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2416595_15
unknown

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comp(11559..12293)
DNA (735bp) protein (245aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2416595_16
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(12295..12756)
DNA (462bp) protein (154aa)
Predicted protein Tax=Streptomyces sp. AA4 RepID=D9V0V0_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL06709.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
copper binding protein of plastocyanin/azurin family
S_p1_S3_coassembly_k141_2416595_17

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12905..14434
DNA (1530bp) protein (510aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Helicase {ECO:0000313|EMBL:KHO46436.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO46436.1};; species="Archaea.;" source="archaeon GW2011_AR3.;"
ski2-like helicase
S_p1_S3_coassembly_k141_2416595_18
unknown

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14424..15023
DNA (600bp) protein (200aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2416595_19
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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15059..15382
DNA (324bp) protein (108aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
hypothetical protein Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI0003809ABD
S_p1_S3_coassembly_k141_2416595_20
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(15464..16033)
DNA (570bp) protein (190aa)
id=5045280 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=CG_Pacearch_04
S_p1_S3_coassembly_k141_2416595_trna_1
unknown

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comp(16035..16109)
DNA (75bp)
transferRNA Arg
S_p1_S3_coassembly_k141_2416595_21
RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(16151..16786)
DNA (636bp) protein (212aa)
Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated
S_p1_S3_coassembly_k141_2416595_22
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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16859..17062
DNA (204bp) protein (68aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB45347.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
S_p1_S3_coassembly_k141_2416595_23
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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17066..17365
DNA (300bp) protein (100aa)
Addiction module toxin, RelE/StbE family Tax=Halothece sp. (strain PCC 7418) RepID=K9YEL7_HALP7
Uncharacterized protein {ECO:0000313|EMBL:AKB79934.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein
Displaying 24 items

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