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S_p1_S3_coassembly_k141_303723

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_303723_1
unknown

Not on your lists

comp(2..325)
DNA (324bp) protein (108aa)

This feature has no annotations

S_p1_S3_coassembly_k141_303723_2
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

comp(335..487)
DNA (153bp) protein (51aa)
id=5045710 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=RBG_13_Euryarchaeota_31_8_curated
S_p1_S3_coassembly_k141_303723_3
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

Not on your lists

1086..1691
DNA (606bp) protein (202aa)
Trichohyalin, putative Tax=Trichomonas vaginalis RepID=A2FV34_TRIVA
Trichohyalin, putative {ECO:0000313|EMBL:EAX91231.1}; species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
hypothetical protein
S_p1_S3_coassembly_k141_303723_4
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

1762..3810
DNA (2049bp) protein (683aa)
Xylose isomerase-like, TIM barrel domain bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_303723_5

Not on your lists

comp(3920..4330)
DNA (411bp) protein (137aa)
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
N utilization substance protein A {ECO:0000313|EMBL:KHO46957.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
S_p1_S3_coassembly_k141_303723_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4327..4578)
DNA (252bp) protein (84aa)
LSU ribosomal protein L30E Tax=nanoarchaeote Nst1 RepID=R1E488_9ARCH
hypothetical protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_303723_7

Not on your lists

comp(4571..5683)
DNA (1113bp) protein (371aa)
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:KHO53420.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase subunit A'' bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit A''
S_p1_S3_coassembly_k141_303723_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5680..8310)
DNA (2631bp) protein (877aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
Tax=AR11
S_p1_S3_coassembly_k141_303723_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(8312..10114)
DNA (1803bp) protein (601aa)
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_303723_10
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10107..11585)
DNA (1479bp) protein (493aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
Tax=AR4
S_p1_S3_coassembly_k141_303723_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(11582..11809)
DNA (228bp) protein (76aa)
DNA-directed RNA polymerase, subunit H Tax=nanoarchaeote Nst1 RepID=R1E493_9ARCH bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase, subunit H
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_303723_trna_2
unknown

Not on your lists

comp(11830..11906)
DNA (77bp)
transferRNA Lys
S_p1_S3_coassembly_k141_303723_12
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(12953..13171)
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon Gpl RepID=T0LUZ0_9EURY
hypothetical protein
Tax=CG_Pacearch_04
S_p1_S3_coassembly_k141_303723_13

Not on your lists

13484..13735
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO53599.1}; species="Archaea.;" source="archaeon GW2011_AR13.;"
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
S_p1_S3_coassembly_k141_303723_14
unknown

Not on your lists

comp(13979..14167)
DNA (189bp) protein (63aa)

This feature has no annotations

S_p1_S3_coassembly_k141_303723_15
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

14642..15559
DNA (918bp) protein (306aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T9Y2_9EURY
Bifunctional phosphoglucose/phosphomannose isomerase {ECO:0000313|EMBL:KKU99677.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
S_p1_S3_coassembly_k141_303723_16
unknown

Not on your lists

15556..16353
DNA (798bp) protein (266aa)

This feature has no annotations

S_p1_S3_coassembly_k141_303723_17
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

16350..17036
DNA (687bp) protein (229aa)
seg bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR15
S_p1_S3_coassembly_k141_303723_18
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

17479..19542
DNA (2064bp) protein (688aa)
SMC domain protein Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SMC protein
Tax=AR20
S_p1_S3_coassembly_k141_303723_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

19603..21003
DNA (1401bp) protein (467aa)
transmembrane_regions bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_303723_20
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

21214..21888
DNA (675bp) protein (225aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000255|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000255|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /; NBRC 100139 / OT-3).;"
Triosephosphate isomerase Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=TPIS_PYRHO
S_p1_S3_coassembly_k141_303723_21
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(21864..22442)
DNA (579bp) protein (193aa)
Tax=AR6
S_p1_S3_coassembly_k141_303723_22
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(23024..23251)
DNA (228bp) protein (76aa)
Tax=CG_Woesearch_03
S_p1_S3_coassembly_k141_303723_23
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(23254..23838)
DNA (585bp) protein (195aa)
Tax=RBG_16_Pacearchaeota_35_8_curated
S_p1_S3_coassembly_k141_303723_24
RHI_OP11_Curtissbacteria_41_17, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

23935..24543
DNA (609bp) protein (203aa)
Tax=RIFCSPHIGHO2_12_FULL_OP11_Curtissbacteria_41_17_curated
S_p1_S3_coassembly_k141_303723_trna_1
unknown

Not on your lists

comp(24691..24763)
DNA (73bp)
transferRNA Val
S_p1_S3_coassembly_k141_303723_25
unknown

Not on your lists

24927..25103
DNA (177bp) protein (59aa)

This feature has no annotations

S_p1_S3_coassembly_k141_303723_26

Not on your lists

comp(25114..25770)
DNA (657bp) protein (219aa)
Putative uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61686.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
S_p1_S3_coassembly_k141_303723_27
unknown

Not on your lists

25808..26968
DNA (1161bp) protein (387aa)

This feature has no annotations

S_p1_S3_coassembly_k141_303723_28
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26965..27627
DNA (663bp) protein (221aa)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI0003724E03
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:AKD05279.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
Displaying items 1-30 of 48 in total

View Taxonomy