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S_p1_S3_coassembly_k141_1294994

Search features with annotation key words

Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1294994_1
unknown

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comp(1..387)
DNA (387bp) protein (129aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1294994_2
unknown

Not on your lists

619..873
DNA (255bp) protein (85aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1294994_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

942..1685
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7M8_UNCMA
hypothetical protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_1294994_4

Not on your lists

1700..2251
DNA (552bp) protein (184aa)
Putative bacteriochlorophyll 4-vinyl reductase Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JNU2_SYNJB
Uncharacterized protein {ECO:0000313|EMBL:KHO55013.1}; species="Archaea.;" source="archaeon GW2011_AR21.;"
bacteriochlorophyll 4-vinyl reductase
S_p1_S3_coassembly_k141_1294994_5
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(2252..3118)
DNA (867bp) protein (289aa)
Digeranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01286}; Short=DGGGP synthase {ECO:0000256|HAMAP-Rule:MF_01286};; Short=DGGGPS {ECO:0000256|HAMAP-Rule:MF_01286};; EC=2.5.1.42 {ECO:0000256|HAMAP-Rule:MF_01286};; (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01286}; Geranylgeranylglycerol-phosphate geranylgeranyltransferase {ECO:0000256|HAMAP-Rule:MF_01286}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus sp. (strain FS406-22).;"
Digeranylgeranylglyceryl phosphate synthase Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S7F1_METSF
UbiA prenyltransferase
S_p1_S3_coassembly_k141_1294994_6
Roseivivax atlanticus, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3242..4327
DNA (1086bp) protein (362aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YN00_9ALTE
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ETW10691.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax atlanticus.;"
HI0933 family protein
S_p1_S3_coassembly_k141_1294994_7
unknown

Not on your lists

4674..4979
DNA (306bp) protein (102aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1294994_8
R_RIF_OD1_04_46_16, RIF-OD1-4, Parcubacteria, Bacteria

Not on your lists

5564..6106
DNA (543bp) protein (181aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_04_46_16_curated
S_p1_S3_coassembly_k141_1294994_9
unknown

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6432..6794
DNA (363bp) protein (121aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1294994_10
unknown

Not on your lists

6811..7506
DNA (696bp) protein (232aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1294994_11
unknown

Not on your lists

7511..8047
DNA (537bp) protein (179aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1294994_12
unknown

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8049..8753
DNA (705bp) protein (235aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1294994_13
unknown

Not on your lists

8750..8911
DNA (162bp) protein (54aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1294994_14
unknown

Not on your lists

8856..9122
DNA (267bp) protein (89aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1294994_15

Not on your lists

9161..10150
DNA (990bp) protein (330aa)
bifunctional short chain isoprenyl diphosphate synthase bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Bifunctional short chain isoprenyl diphosphate synthase {ECO:0000313|EMBL:KHO48122.1}; species="Archaea.;" source="archaeon GW2011_AR5.;"
idsA; bifunctional short chain isoprenyl diphosphate synthase IdsA
S_p1_S3_coassembly_k141_1294994_16
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10208..10954
DNA (747bp) protein (249aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8THD2_METAC
Uncharacterized protein {ECO:0000313|EMBL:AKB26778.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae T4/M.;"
hypothetical protein
S_p1_S3_coassembly_k141_1294994_17
unknown

Not on your lists

10997..11461
DNA (465bp) protein (155aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1294994_18
R_OD1_Magasanikbacteria_50_9b, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11455..12051)
DNA (597bp) protein (199aa)
id=4010251 bin=PER_GWC2_41_7 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_50_9b_curated
S_p1_S3_coassembly_k141_1294994_19
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

12122..14266
DNA (2145bp) protein (715aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
ski2-like helicase
Tax=AR5
S_p1_S3_coassembly_k141_1294994_20
Populus trichocarpa, Populus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

14343..14801
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Brassica rapa subsp. pekinensis RepID=M4F0L0_BRARP
putative signal transduction protein with CBS domains
CBS domain-containing family protein {ECO:0000313|EMBL:EEE83537.1}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.;" source="Populus trichocarpa (Western balsam poplar) (Populus balsamifera; subsp. trichocarpa).;"
S_p1_S3_coassembly_k141_1294994_21

Not on your lists

14828..15982
DNA (1155bp) protein (385aa)
Na(+)/H(+) antiporter bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KHO48020.1}; species="Archaea.;" source="archaeon GW2011_AR5.;"
putative Na+/H+ antiporter
S_p1_S3_coassembly_k141_1294994_trna_1
unknown

Not on your lists

16106..16251
DNA (146bp)
transferRNA Pro
S_p1_S3_coassembly_k141_1294994_22
unknown

Not on your lists

16322..16744
DNA (423bp) protein (141aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1294994_23
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16830..18017)
DNA (1188bp) protein (396aa)
Uncharacterized protein Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BVC6_METCG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB68360.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
S_p1_S3_coassembly_k141_1294994_24
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18017..18535)
DNA (519bp) protein (173aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psychrophilus R15.;"
CRISPR-associated endonuclease Cas1 Tax=Methanolobus psychrophilus R15 RepID=K4M7H4_9EURY
CRISPR-associated protein, Cas1 family
S_p1_S3_coassembly_k141_1294994_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18822..19328
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Vittaforma corneae (strain ATCC 50505) RepID=L2GMM2_VITCO
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
S_p1_S3_coassembly_k141_1294994_26
unknown

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comp(19310..19819)
DNA (510bp) protein (170aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1294994_27
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19959..20471)
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8THH7_METAC
Dihydrofolate reductase {ECO:0000313|EMBL:KKH62736.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
hypothetical protein
S_p1_S3_coassembly_k141_1294994_28
unknown

Not on your lists

comp(20785..21051)
DNA (267bp) protein (89aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1294994_trna_5
unknown

Not on your lists

comp(21222..21354)
DNA (133bp)
transferRNA Sup
Displaying items 1-30 of 122 in total

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