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S_p1_S3_coassembly_k141_99388

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Displaying items 1-30 of 77 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_99388_1
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(3..866)
DNA (864bp) protein (288aa)
id=4414151 bin=GWC2_OP3-like_45_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_99388_2

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comp(1106..1312)
DNA (207bp) protein (69aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037669E6
Marine sediment metagenome DNA, contig: S12H4_L00628 {ECO:0000313|EMBL:GAI78303.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S_p1_S3_coassembly_k141_99388_3
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(1405..2628)
DNA (1224bp) protein (408aa)
Transposase, IS4 family protein/SWIM domain fusion bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
transposase family protein
Tax=CG_Pacearch_06
S_p1_S3_coassembly_k141_99388_4

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2914..3822
DNA (909bp) protein (303aa)
dam; site-specific DNA adenine methylase (EC:2.1.1.72)
Site-specific DNA adenine methylase Tax=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) RepID=Q4UN84_RICFE
Uncharacterized protein {ECO:0000313|EMBL:KKK56208.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_99388_5
Rickettsia parkeri, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3826..4284
DNA (459bp) protein (153aa)
DNA adenine methyltransferase (MboA) Tax=Rickettsia parkeri (strain Portsmouth) RepID=H8KEC1_RICPT
DNA adenine methyltransferase (MboA)
D12 class N6 adenine-specific DNA methyltransferase family protein {ECO:0000313|EMBL:KJV93695.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group.;" source="Rickettsia parkeri str. Grand Bay.;"
S_p1_S3_coassembly_k141_99388_6
unknown

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comp(4279..5064)
DNA (786bp) protein (262aa)

This feature has no annotations

S_p1_S3_coassembly_k141_99388_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5061..6170)
DNA (1110bp) protein (370aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI00034B3B7C
Uncharacterized protein {ECO:0000313|EMBL:EDY32928.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
S_p1_S3_coassembly_k141_99388_8
unknown

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6222..6452
DNA (231bp) protein (77aa)

This feature has no annotations

S_p1_S3_coassembly_k141_99388_9
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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comp(6688..8394)
DNA (1707bp) protein (569aa)
Cell wall surface anchor family protein bin=GWA2_Elusimicrobia_69_24 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
phage related tail fibre protein
Tax=GWA2_Elusimicrobia_69_24_curated
S_p1_S3_coassembly_k141_99388_10
unknown

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comp(8394..8528)
DNA (135bp) protein (45aa)

This feature has no annotations

S_p1_S3_coassembly_k141_99388_11
R_OD1_Wolfebacteria_47_17b, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

8744..9163
DNA (420bp) protein (140aa)
Prefoldin subunit alpha Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXD5_METFV
prefoldin subunit alpha
Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_47_17b_curated
S_p1_S3_coassembly_k141_99388_12
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

9164..10297
DNA (1134bp) protein (378aa)
Signal recognition particle receptor FtsY Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S5U2_METSF
signal recognition particle-docking protein FtsY
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_99388_13
R_OD1_Wolfebacteria_47_17b, Wolfebacteria, Parcubacteria, Bacteria

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10311..11636
DNA (1326bp) protein (442aa)
Signal recognition particle 54 kDa protein Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3T9E7_ACIB4
GTP-binding signal recognition particle SRP54 G-domain protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_47_17b_curated
S_p1_S3_coassembly_k141_99388_14
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

11654..12889
DNA (1236bp) protein (412aa)
tRNA pseudouridine synthase Pus10 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XN18_METZD
THUMP domain-containing protein
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_99388_15
unknown

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12975..13727
DNA (753bp) protein (251aa)

This feature has no annotations

S_p1_S3_coassembly_k141_99388_16
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists


13852..14136
DNA (285bp) protein (95aa)
50S ribosomal protein L21e Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RL21_METKA
50S ribosomal protein L21e
50S ribosomal protein L21e {ECO:0000255|HAMAP-Rule:MF_00369}; species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC; 100938).;"
S_p1_S3_coassembly_k141_99388_17
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

14171..14497
DNA (327bp) protein (109aa)
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase subunit F Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPL8_NATPD
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_99388_18
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

14515..15066
DNA (552bp) protein (184aa)
Putative uncharacterized protein Tax=Thermococcus onnurineus (strain NA1) RepID=B6YTK6_THEON
hypothetical protein
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_99388_19
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

15081..16091
DNA (1011bp) protein (337aa)
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CN91_DESK7
Tax=RBG_13_Bathyarchaeota_46_16b_curated
S_p1_S3_coassembly_k141_99388_20

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comp(16080..16292)
DNA (213bp) protein (71aa)
Marine sediment metagenome DNA, contig: S01H1_S04198 {ECO:0000313|EMBL:GAF86522.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_99388_21
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists

comp(16335..16592)
DNA (258bp) protein (86aa)
Elongation factor 1-beta Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=EF1B_METKA
EFB1; translation elongation factor EF-1beta
Elongation factor 1-beta {ECO:0000255|HAMAP-Rule:MF_00043}; Short=EF-1-beta {ECO:0000255|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000255|HAMAP-Rule:MF_00043}; species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC; 100938).;"
S_p1_S3_coassembly_k141_99388_22
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(16892..17806)
DNA (915bp) protein (305aa)
ribonuclease Z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
ribonuclease Z
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_99388_23
unknown

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17883..18083
DNA (201bp) protein (67aa)

This feature has no annotations

S_p1_S3_coassembly_k141_99388_24
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(18086..19513)
DNA (1428bp) protein (476aa)
cca; CCA-adding enzyme; K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
tRNA nucleotidyltransferase, archaeal type (EC:2.7.7.72)
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_99388_25
unknown

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comp(19530..19664)
DNA (135bp) protein (45aa)

This feature has no annotations

S_p1_S3_coassembly_k141_99388_26
Candidatus Arthromitus sp. SFB-rat-Yit, Candidatus Arthromitus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19741..20397
DNA (657bp) protein (219aa)
Pyrophosphatase PpaX Tax=Candidatus Arthromitus sp. SFB-rat-Yit RepID=G2IEK1_9CLOT
ppaX; pyrophosphatase PpaX
Pyrophosphatase PpaX {ECO:0000313|EMBL:BAK81575.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Candidatus Arthromitus.;" source="Candidatus Arthromitus sp. SFB-rat-Yit.;"
S_p1_S3_coassembly_k141_99388_27
unknown

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20404..20724
DNA (321bp) protein (107aa)

This feature has no annotations

S_p1_S3_coassembly_k141_99388_28
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists


comp(20721..21947)
DNA (1227bp) protein (409aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1910b.;"
Histidine--tRNA ligase Tax=Thermofilum sp. 1910b RepID=S5ZVU4_9CREN
hypothetical protein
S_p1_S3_coassembly_k141_99388_29
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

22171..25041
DNA (2871bp) protein (957aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_99388_30
R_OP11_Curtissbacteria_41_44, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

25046..25573
DNA (528bp) protein (176aa)
Isopentenyl-diphosphate Delta-isomerase Tax=Caldithrix abyssi DSM 13497 RepID=H1XYN8_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Curtissbacteria_41_44_curated
Displaying items 1-30 of 77 in total

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