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S_p1_S3_coassembly_k141_974168

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_974168_1
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(3..749)
DNA (747bp) protein (249aa)
Probable translation initiation factor IF-2 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY66_METFV
translation initiation factor eaif-5b
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_974168_2
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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856..1293
DNA (438bp) protein (146aa)
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_974168_3
unknown

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1294..1467
DNA (174bp) protein (58aa)

This feature has no annotations

S_p1_S3_coassembly_k141_974168_4
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(1590..3977)
DNA (2388bp) protein (796aa)
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_974168_5
unknown

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comp(4095..4574)
DNA (480bp) protein (160aa)

This feature has no annotations

S_p1_S3_coassembly_k141_974168_trna_1
unknown

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comp(4612..4699)
DNA (88bp)
transferRNA Arg
S_p1_S3_coassembly_k141_974168_6
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(4723..6093)
DNA (1371bp) protein (457aa)
Zinc-dependent protease Tax=Thermococcus litoralis DSM 5473 RepID=H3ZN49_THELI
zinc-dependent protease
Zinc-dependent protease {ECO:0000313|EMBL:EHR78601.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 /; NS-C).;"
S_p1_S3_coassembly_k141_974168_7
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(6094..7521)
DNA (1428bp) protein (476aa)
Putative uncharacterized protein PH0848 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58578_PYRHO
hypothetical protein
Tax=CG_Pacearch_04
S_p1_S3_coassembly_k141_974168_8
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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7587..8312
DNA (726bp) protein (242aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RY84_THEPD
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_974168_9
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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8321..9382
DNA (1062bp) protein (354aa)
Geranylgeranyl reductase Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0T1U1_SYNGF
geranylgeranyl reductase
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_974168_10
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(9379..10410)
DNA (1032bp) protein (344aa)
mevalonate kinase (EC:2.7.1.36); K00869 mevalonate kinase [EC:2.7.1.36] bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
mevalonate kinase
Tax=AR5
S_p1_S3_coassembly_k141_974168_11
unknown

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comp(10439..11269)
DNA (831bp) protein (277aa)

This feature has no annotations

S_p1_S3_coassembly_k141_974168_12
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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11397..12443
DNA (1047bp) protein (349aa)
UPF0219 protein Mfer_0083 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWZ8_METFV
hydroxymethylglutaryl-CoA synthase
UPF0219 protein Mfer_0083 {ECO:0000256|HAMAP-Rule:MF_01409}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
S_p1_S3_coassembly_k141_974168_13
CG_Micra_02, Micraarchaeota, Archaea

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12448..13605
DNA (1158bp) protein (386aa)
acetyl-CoA C-acetyltransferase (EC:2.3.1.9)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Micra_02
S_p1_S3_coassembly_k141_974168_14
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

13607..14032
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRA2_METIM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG13105.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
S_p1_S3_coassembly_k141_974168_15
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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14016..15143
DNA (1128bp) protein (376aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha Tax=uncultured candidate division OP1 bacterium RepID=H5ST06_9BACT
Tax=RBG_16_Bathyarchaeota_48_13_curated
S_p1_S3_coassembly_k141_974168_16

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15140..16114
DNA (975bp) protein (325aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Pyruvate dehydrogenase E1 component subunit beta {ECO:0000313|EMBL:KHO45396.1}; EC=1.2.4.1 {ECO:0000313|EMBL:KHO45396.1};; species="Archaea.;" source="archaeon GW2011_AR3.;"
transketolase (EC:1.2.4.1)
S_p1_S3_coassembly_k141_974168_17
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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16137..17375
DNA (1239bp) protein (413aa)
Hydroxymethylglutaryl-CoA reductase (NADPH) Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIJ9_9EURY
Hydroxymethylglutaryl-CoA reductase (NADPH) {ECO:0000313|EMBL:EET89773.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
3-hydroxy-3-methylglutaryl coenzyme A reductase
S_p1_S3_coassembly_k141_974168_18
R_OD1_Yanofskybacteria_50_12, Yanofskybacteria, Parcubacteria, Bacteria

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17516..20023
DNA (2508bp) protein (836aa)
DNA or RNA helicases of superfamily II Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K3D8_9FIRM bin=ACD50 species=Faecalibacterium prausnitzii genus=Faecalibacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA/RNA helicase, superfamily II
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_50_12_curated
Displaying 19 items

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