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S_p1_S3_coassembly_k141_1231753

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1231753_1
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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2..721
DNA (720bp) protein (240aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U516_9EURY
S_p1_S3_coassembly_k141_1231753_2
unknown

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742..1080
DNA (339bp) protein (113aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1231753_3
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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1441..2268
DNA (828bp) protein (276aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
hypothetical protein Tax=candidate division YNPFFA RepID=UPI0003826EBE
Tax=RBG_16_Thaumarchaeota_49_8_curated
S_p1_S3_coassembly_k141_1231753_4
unknown

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comp(2280..2654)
DNA (375bp) protein (125aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1231753_5
unknown

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2721..4253
DNA (1533bp) protein (511aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1231753_6
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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4297..5637
DNA (1341bp) protein (447aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1).;"
Adenylosuccinate lyase Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=PUR8_PYRAB
S_p1_S3_coassembly_k141_1231753_7
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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5711..6856
DNA (1146bp) protein (382aa)
ATP-utilizing enzymes of ATP-grasp superfamily (Probably carboligases) Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIR8_9EURY
ATP-utilizing enzymes of ATP-grasp superfamily (probably carboligases)
ATP-utilizing enzymes of ATP-grasp superfamily (Probably carboligases) {ECO:0000313|EMBL:AGK60371.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
S_p1_S3_coassembly_k141_1231753_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6853..8001
DNA (1149bp) protein (383aa)
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase Tax=Methanosarcina acetivorans RepID=PURP_METAC
purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
Tax=RBG_13_Bathyarchaeota_38_9_curated
S_p1_S3_coassembly_k141_1231753_9
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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8004..8495
DNA (492bp) protein (164aa)
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B bin=Nanosalina tax=Nanosalina
scpB; chromosome segregation and condensation protein ScpB
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_1231753_10
AR6, Pacearchaeaota, DPANN, Archaea

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8531..9001
DNA (471bp) protein (157aa)
comEB; ComE operon protein 2 (EC:3.5.-.-)
dCMP deaminase Tax=uncultured bacterium RepID=K1Y223_9BACT
Tax=AR6
S_p1_S3_coassembly_k141_1231753_11
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9005..10894)
DNA (1890bp) protein (630aa)
UPI0003D1B100 related cluster Tax=unknown RepID=UPI0003D1B100
Uncharacterized protein {ECO:0000313|EMBL:ETA67863.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
polymorphic outer membrane protein
S_p1_S3_coassembly_k141_1231753_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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11064..11873
DNA (810bp) protein (270aa)
Uncharacterized protein Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KE37_METBM
restriction endonuclease
Tax=RBG_13_Bathyarchaeota_38_9_curated
S_p1_S3_coassembly_k141_1231753_13
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(11891..12583)
DNA (693bp) protein (231aa)
Nuclease (SNase domain protein) Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S314_FERPA
nuclease (SNase domain protein)
Nuclease (SNase domain protein) {ECO:0000313|EMBL:ADC64647.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
S_p1_S3_coassembly_k141_1231753_14
RBG_16_Archaea_50_20_curated, Archaea

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comp(12618..13454)
DNA (837bp) protein (279aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Mannose-1-phosphate guanylyltransferase Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D8B8_METSW
Tax=RBG_16_Archaea_50_20_curated
S_p1_S3_coassembly_k141_1231753_15
Sulfolobus acidocaldarius, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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13563..14783
DNA (1221bp) protein (407aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /; NBRC 15157 / NCIMB 11770).;"
Phosphoglycerate kinase Tax=Sulfolobus acidocaldarius RepID=PGK_SULAC
S_p1_S3_coassembly_k141_1231753_16
Sulfolobus solfataricus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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14789..15817
DNA (1029bp) protein (343aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388};; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559}; species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus solfataricus.;"
Glyceraldehyde-3-phosphate dehydrogenase Tax=Sulfolobus solfataricus RepID=G3P_SULSO
S_p1_S3_coassembly_k141_1231753_17
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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15829..16506
DNA (678bp) protein (226aa)
Triosephosphate isomerase Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=TPIS_METJA
triosephosphate isomerase
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_1231753_18
unknown

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comp(16521..17051)
DNA (531bp) protein (177aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1231753_19
unknown

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comp(17017..17685)
DNA (669bp) protein (223aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1231753_20
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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17776..18741
DNA (966bp) protein (322aa)
Uncharacterized protein Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WX59_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY53987.1}; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongolicus JCM 12255.;"
S_p1_S3_coassembly_k141_1231753_21
Dactylellina haptotyla, Dactylellina, Orbiliales, Orbiliomycetes, Ascomycota, Fungi

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comp(18730..21414)
DNA (2685bp) protein (895aa)
Uncharacterized protein Tax=Dactylellina haptotyla (strain CBS 200.50) RepID=S8BKR7_DACHA
Uncharacterized protein {ECO:0000313|EMBL:EPS39983.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Orbiliomycetes; Orbiliales; Orbiliaceae; mitosporic Orbiliaceae; Dactylellina.;" source="Dactylellina haptotyla (strain CBS 200.50) (Nematode-trapping fungus); (Monacrosporium haptotylum).;"
glycosyl hydrolase
S_p1_S3_coassembly_k141_1231753_22
unknown

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comp(21491..21988)
DNA (498bp) protein (166aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1231753_23
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(22015..22638)
DNA (624bp) protein (208aa)
endonuclease iii ;DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.- 4.2.99.18)
DNA-(Apurinic or apyrimidinic site) lyase Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EG12_9EURY
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1231753_24
RHI_RIF_OD1_07_40_12, RIF-OD1-7, Parcubacteria, Bacteria

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22688..23311
DNA (624bp) protein (208aa)
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_07_40_12_curated
S_p1_S3_coassembly_k141_1231753_25
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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23301..26102
DNA (2802bp) protein (934aa)
ATP dependent helicase, Lhr family bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
DEAD/DEAH box helicase domain-containing protein
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1231753_26
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(26131..26574)
DNA (444bp) protein (148aa)
Uncharacterized membrane protein Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KK10_9ARCH
Uncharacterized membrane protein {ECO:0000313|EMBL:EGG42177.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
MgtC/SapB transporter
S_p1_S3_coassembly_k141_1231753_27
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

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26627..27220
DNA (594bp) protein (198aa)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
S_p1_S3_coassembly_k141_1231753_trna_2
unknown

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comp(27221..27305)
DNA (85bp)
transferRNA Val
S_p1_S3_coassembly_k141_1231753_28
RLO_OD1_Moranbacteria_48_12, Moranbacteria, Parcubacteria, Bacteria

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27341..28054
DNA (714bp) protein (238aa)
Methyltransferase type 11 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Methyltransferase type 11
Tax=RIFCSPLOWO2_12_FULL_OD1_Moranbacteria_48_12_curated
S_p1_S3_coassembly_k141_1231753_29

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comp(28061..28573)
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TCH1_9ARCH
Marine sediment metagenome DNA, contig: S06H3_L04795 {ECO:0000313|EMBL:GAI13512.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA methylase
Displaying items 1-30 of 33 in total

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