ggKbase home page

S_p1_S3_coassembly_k141_1636910

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1636910_1
unknown

Not on your lists

42..257
DNA (216bp) protein (72aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1636910_2
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(254..643)
DNA (390bp) protein (130aa)
30S ribosomal protein S8e Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXJ1_METFV
30S ribosomal protein S8e
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
S_p1_S3_coassembly_k141_1636910_3
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

737..964
DNA (228bp) protein (76aa)
Small nuclear ribonucleoprotein, LSM family; K04796 small nuclear ribonucleoprotein bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
small nuclear ribonucleoprotein
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1636910_4
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

977..1657
DNA (681bp) protein (227aa)
Putative uncharacterized protein Tax=uncultured archaeon GZfos27E6 RepID=Q64BC6_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG98373.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus DSM 8774.;"
S_p1_S3_coassembly_k141_1636910_5
unknown

Not on your lists

1989..2333
DNA (345bp) protein (115aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1636910_6
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

2491..2778
DNA (288bp) protein (96aa)
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_1636910_trna_1
unknown

Not on your lists

2863..2936
DNA (74bp)
transferRNA Lys
S_p1_S3_coassembly_k141_1636910_7
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

2963..3229
DNA (267bp) protein (89aa)
Putative uncharacterized protein Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EF13_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EEZ93039.1}; species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidiphilum ARMAN-4.;"
hypothetical protein
S_p1_S3_coassembly_k141_1636910_8
unknown

Not on your lists

3239..3559
DNA (321bp) protein (107aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1636910_9
unknown

Not on your lists

3598..3783
DNA (186bp) protein (62aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1636910_10
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

3780..6284
DNA (2505bp) protein (835aa)
SMC domain-containing protein; K03529 chromosome segregation protein bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Chromosome partition protein Smc
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1636910_11
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

6281..6985
DNA (705bp) protein (235aa)
condensin subunit ScpA; K05896 segregation and condensation protein A bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Chromosome segregation and condensation protein ScpA
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_1636910_12
unknown

Not on your lists

comp(7000..7230)
DNA (231bp) protein (77aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1636910_13
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(7223..8734)
DNA (1512bp) protein (504aa)
hypothetical protein Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI000379BA18
putative lipoprotein
Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
S_p1_S3_coassembly_k141_1636910_14
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

8951..10369
DNA (1419bp) protein (473aa)
purF; Amidophosphoribosyltransferase (EC:2.4.2.14)
hypothetical protein Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI0003762EAD
Tax=CG_Micra_05
S_p1_S3_coassembly_k141_1636910_15
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

10404..11696
DNA (1293bp) protein (431aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Phosphoribosylamine--glycine ligase Tax=Thaumarchaeota archaeon N4 RepID=V6ATY0_9ARCH
phosphoribosylamine--glycine ligase
S_p1_S3_coassembly_k141_1636910_16
unknown

Not on your lists

comp(11664..11915)
DNA (252bp) protein (84aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1636910_17
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11992..12777
DNA (786bp) protein (262aa)
Formyl transferase Tax=delta proteobacterium NaphS2 RepID=D8F4L8_9DELT
Formyl transferase {ECO:0000313|EMBL:EFK09301.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
CoA-binding protein
S_p1_S3_coassembly_k141_1636910_18
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

12920..13900
DNA (981bp) protein (327aa)
Fibronectin type III domain protein bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
S_p1_S3_coassembly_k141_1636910_19
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

14018..15532
DNA (1515bp) protein (505aa)
Bifunctional purine biosynthesis protein PurH {ECO:0000255|HAMAP-Rule:MF_00139}; Includes:; Phosphoribosylaminoimidazolecarboxamide formyltransferase {ECO:0000255|HAMAP-Rule:MF_00139}; EC=2.1.2.3 {ECO:0000255|HAMAP-Rule:MF_00139};; AICAR transformylase {ECO:0000255|HAMAP-Rule:MF_00139}; Includes:; IMP cyclohydrolase {ECO:0000255|HAMAP-Rule:MF_00139}; EC=3.5.4.10 {ECO:0000255|HAMAP-Rule:MF_00139};; ATIC {ECO:0000255|HAMAP-Rule:MF_00139}; IMP synthase {ECO:0000255|HAMAP-Rule:MF_00139}; Inosinicase {ECO:0000255|HAMAP-Rule:MF_00139}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
Bifunctional purine biosynthesis protein PurH Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=PUR9_THETN
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
S_p1_S3_coassembly_k141_1636910_20
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

15548..16450
DNA (903bp) protein (301aa)
5,10-methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=FOLD_PYRCJ
Tax=RBG_16_Thaumarchaeota_49_8_curated
S_p1_S3_coassembly_k141_1636910_21
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

16447..17061
DNA (615bp) protein (205aa)
5-formyltetrahydrofolate cyclo-ligase family protein Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AE50_CARHZ
5-formyltetrahydrofolate cyclo-ligase
Tax=RBG_13_Nitrospirae_43_8_curated
S_p1_S3_coassembly_k141_1636910_22
R_RIF_OD1_07_49_22b, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(17079..17369)
DNA (291bp) protein (97aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding protein bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
endonuclease V
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_49_22b_curated
S_p1_S3_coassembly_k141_1636910_23
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17388..18461)
DNA (1074bp) protein (358aa)
PurM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PUR5_METKA
Tax=RBG_13_Bathyarchaeota_46_16b_curated
S_p1_S3_coassembly_k141_1636910_24
unknown

Not on your lists

comp(18734..19123)
DNA (390bp) protein (130aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1636910_25
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(19149..19952)
DNA (804bp) protein (268aa)
Phosphoribosylformylglycinamidine synthase 1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IH30_ACIB4
phosphoribosylformylglycinamidine synthase I
Tax=RBG_13_Bathyarchaeota_46_16b_curated
S_p1_S3_coassembly_k141_1636910_26
unknown

Not on your lists

comp(19972..20499)
DNA (528bp) protein (176aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1636910_27
unknown

Not on your lists

comp(20524..21363)
DNA (840bp) protein (280aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1636910_28
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21360..21497)
DNA (138bp) protein (46aa)
CopG-like DNA-binding bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
S_p1_S3_coassembly_k141_1636910_29
unknown

Not on your lists

comp(21503..22015)
DNA (513bp) protein (171aa)

This feature has no annotations

Displaying items 1-30 of 38 in total

View Taxonomy