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S_p1_S3_coassembly_k141_2282248

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2282248_1

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1..1089
DNA (1089bp) protein (363aa)
mag:amb0139 nucleoside-diphosphate-sugar epimerase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
putative NAD-dependent epimerase/dehydratase (EC:4.1.1.35)
Uncharacterized protein {ECO:0000313|EMBL:EKD64785.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S_p1_S3_coassembly_k141_2282248_2
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1086..1982
DNA (897bp) protein (299aa)
Glycosyltransferase {ECO:0000313|EMBL:AKB86148.1}; EC=2.4.1.- {ECO:0000313|EMBL:AKB86148.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
rhamnosyltransferase Tax=Clostridium arbusti RepID=UPI0002887F28
putative glycosyltransferase
S_p1_S3_coassembly_k141_2282248_3
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(1984..2697)
DNA (714bp) protein (238aa)
dTDP-4-dehydrorhamnose reductase Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BA85_9ARCH
dTDP-4-dehydrorhamnose reductase
Tax=CG_CPR10_01
S_p1_S3_coassembly_k141_2282248_4
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(2756..3874)
DNA (1119bp) protein (373aa)
UDP-N-acetylglucosamine 4,6-dehydratase (inverting) (EC:4.2.1.115)
Polysaccharide biosynthesis protein CapD Tax=Methanolinea tarda NOBI-1 RepID=G6FJ61_9EURY
Tax=CG_CPR10_01
S_p1_S3_coassembly_k141_2282248_5
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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3975..5003
DNA (1029bp) protein (343aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003693E69
Glycosyl transferase family 4
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_2282248_6
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(4986..6506)
DNA (1521bp) protein (507aa)
Polysaccharide biosynthesis protein Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9REC7_METVM
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ACX71929.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7); (Methanococcus vulcanius).;"
S_p1_S3_coassembly_k141_2282248_7
GWA2_OP11_nov_ACD37_41_15, Levybacteria, Microgenomates, Bacteria

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6546..8102
DNA (1557bp) protein (519aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR94431.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA2_41_15.;"
conserved membrane protein of unknown function
Dolichyl-phosphate-mannose-protein mannosyltransferase bin=GWE2_Bacteroidetes_42_39 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
S_p1_S3_coassembly_k141_2282248_8
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

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comp(8074..9225)
DNA (1152bp) protein (384aa)
Glycosyl transferase group 1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DNF8_HALPG
group 1 glycosyl transferase
Tax=RBG_13_WOR_2_44_8_curated
S_p1_S3_coassembly_k141_2282248_9
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(9236..9712)
DNA (477bp) protein (159aa)
beta-1,4-galactosyltransferase Tax=Thermococcus zilligii RepID=UPI00029AC192
beta-1,4-galactosyltransferase
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_2282248_10
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9709..10161)
DNA (453bp) protein (151aa)
Oligosaccharide biosynthesis protein Tax=Anoxybacillus sp. DT3-1 RepID=M5R903_9BACI
cpsF; polysaccharide biosynthesis protein CpsF
Tax=RBG_16_Deltaproteobacteria_49_23_curated
S_p1_S3_coassembly_k141_2282248_11
unknown

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comp(10239..10412)
DNA (174bp) protein (58aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2282248_12
unknown

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10523..10708
DNA (186bp) protein (62aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2282248_13
AR9, Woesearchaeaota, DPANN, Archaea

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10705..10965
DNA (261bp) protein (87aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C8224
putative RelE protein
Tax=AR9
S_p1_S3_coassembly_k141_2282248_14
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10990..12660)
DNA (1671bp) protein (557aa)
Uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
S_p1_S3_coassembly_k141_2282248_15
unknown

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comp(12629..13135)
DNA (507bp) protein (169aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2282248_16
AR10, Diapherotrites, DPANN, Archaea

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comp(13207..14118)
DNA (912bp) protein (304aa)
family 2 glycosyl transferase
family 2 glycosyl transferase bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_2282248_17
AR10, Diapherotrites, DPANN, Archaea

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14165..15256
DNA (1092bp) protein (364aa)
WecB/TagA/CpsF family glycosyl transferase
WecB/TagA/CpsF family glycosyl transferase bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p1_S3_coassembly_k141_2282248_18
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

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comp(15257..16072)
DNA (816bp) protein (272aa)
Cell-wall biogenesis glycosyltransferase putative Tax=Clostridium sp. CAG:440 RepID=R7GFW1_9CLOT
glycosyl transferase family 2
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
S_p1_S3_coassembly_k141_2282248_19

Not on your lists

16154..17320
DNA (1167bp) protein (389aa)
glycosyl transferase group 1
glycosyl transferase group 1 bin=GW2011_AR10_complete species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Glycosyl transferase group 1 {ECO:0000313|EMBL:AJF60063.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p1_S3_coassembly_k141_2282248_20
R_OP11_Curtissbacteria_41_11, Curtissbacteria, Microgenomates, Bacteria

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17372..17560
DNA (189bp) protein (63aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RIFCSPLOWO2_02_OP11_Curtissbacteria_41_11_curated
S_p1_S3_coassembly_k141_2282248_21
GWC1_OD1_43_30, Parcubacteria, Bacteria

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17547..18413
DNA (867bp) protein (289aa)
Methyltransferase type 11 {ECO:0000313|EMBL:KKT14771.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_30.;"
Methyltransferase type 11 bin=GWB2_Ignavibacteria_35_12 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
ubiquinone/menaquinone biosynthesis methylase
S_p1_S3_coassembly_k141_2282248_22
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

18410..19399
DNA (990bp) protein (330aa)
hypothetical protein bin=bin1_lowGC species=Desulfovibrio oxyclinae genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
S_p1_S3_coassembly_k141_2282248_23
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(19402..20100)
DNA (699bp) protein (233aa)
glycosyltransferase (EC:2.4.1.-); K00754 [EC:2.4.1.-] bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
cell wall biosynthesis glycosyltransferase
Tax=RBG_16_Archaea_50_20_curated
S_p1_S3_coassembly_k141_2282248_24
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20125..21054)
DNA (930bp) protein (310aa)
Short chain dehydrogenase family protein Tax=Desulfosporosinus sp. OT RepID=G2FKV2_9FIRM
NAD-dependent epimerase/dehydratase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
S_p1_S3_coassembly_k141_2282248_25
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(21051..22328)
DNA (1278bp) protein (426aa)
DegT/DnrJ/EryC1/StrS aminotransferase Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DXH0_9EURY
putative aminotransferase [DegT/DnrJ/EryC1/StrS domain]
Tax=RBG_16_Chloroflexi_60_22_curated
S_p1_S3_coassembly_k141_2282248_26

Not on your lists

22382..23362
DNA (981bp) protein (327aa)
NAD-dependent epimerase/dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein {ECO:0000313|EMBL:KKM03062.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NAD-dependent epimerase/dehydratase
S_p1_S3_coassembly_k141_2282248_27
Thermotoga naphthophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

23371..24318
DNA (948bp) protein (316aa)
NAD-dependent epimerase/dehydratase Tax=Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) RepID=D2C6D4_THENR
dTDP-D-glucose 4,6-dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ADA66520.1}; species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 /; RKU-10).;"
S_p1_S3_coassembly_k141_2282248_28
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24397..28368
DNA (3972bp) protein (1324aa)
Parallel beta-helix repeat protein Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNG1_ARCVS
Cell surface protein {ECO:0000313|EMBL:AKB25124.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
Cell surface protein
S_p1_S3_coassembly_k141_2282248_29
GWA2_OD1_37_10, Parcubacteria, Bacteria

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comp(28372..29076)
DNA (705bp) protein (235aa)
Putative uncharacterized protein Tax=Clostridium sporogenes PA 3679 RepID=G9F3L9_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:KKQ23800.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_37_10.;"
hypothetical protein
S_p1_S3_coassembly_k141_2282248_trna_1
unknown

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comp(29092..29164)
DNA (73bp)
transferRNA Thr
Displaying items 1-30 of 44 in total

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