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S_p1_S3_coassembly_k141_1942260

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1942260_1
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(1..1386)
DNA (1386bp) protein (462aa)
Putative uncharacterized protein bin=GWA2_CPR4_42_17 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
yapH; YapH protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
S_p1_S3_coassembly_k141_1942260_2
Ficedula albicollis, Ficedula, Passeriformes, Aves, Chordata, Metazoa

Not on your lists

comp(1722..2786)
DNA (1065bp) protein (355aa)
Uncharacterized protein Tax=Ficedula albicollis RepID=U3KGZ0_FICAL
Uncharacterized protein {ECO:0000313|Ensembl:ENSFALP00000014294}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.;" source="Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis).;"
hypothetical protein
S_p1_S3_coassembly_k141_1942260_3
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2796..4076)
DNA (1281bp) protein (427aa)
Endosialidase chaperone Tax=Bacteriovorax sp. BSW11_IV RepID=T0RVU8_9DELT
Endosialidase chaperone {ECO:0000313|EMBL:EQC50385.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
hypothetical protein
S_p1_S3_coassembly_k141_1942260_4
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(4190..5398)
DNA (1209bp) protein (403aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
S_p1_S3_coassembly_k141_1942260_5
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(5404..6438)
DNA (1035bp) protein (345aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
membrane-associated zinc metalloprotease
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
S_p1_S3_coassembly_k141_1942260_6
unknown

Not on your lists

6506..6769
DNA (264bp) protein (88aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1942260_7
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(6990..7553)
DNA (564bp) protein (188aa)
ribosome recycling factor; K02838 ribosome recycling factor bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
ribosome recycling factor
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
S_p1_S3_coassembly_k141_1942260_8
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(7563..8390)
DNA (828bp) protein (276aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
dnaX; DNA polymerase III subunit gamma
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_1942260_9
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(8460..9467)
DNA (1008bp) protein (336aa)
mreB; rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rod shape-determining protein MreB
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_1942260_10
unknown

Not on your lists

9505..9744
DNA (240bp) protein (80aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1942260_11
unknown

Not on your lists

9778..10467
DNA (690bp) protein (230aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1942260_12
R_OD1_Giovannonibacteria_46_13, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(10686..11948)
DNA (1263bp) protein (421aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] bin=OD1_GWC2_34_28 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_13_curated
S_p1_S3_coassembly_k141_1942260_13
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists


comp(11955..13271)
DNA (1317bp) protein (439aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000378924E
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
S_p1_S3_coassembly_k141_1942260_14
unknown

Not on your lists

comp(13282..13440)
DNA (159bp) protein (53aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1942260_15
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(13454..15238)
DNA (1785bp) protein (595aa)
alias=gwe2_scaffold_421_39 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_1942260_16
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

comp(15276..15764)
DNA (489bp) protein (163aa)
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
DNA repair protein RecO
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_1942260_17
R_OD1_Nomurabacteria_41_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15786..16838)
DNA (1053bp) protein (351aa)
L-asparaginase (EC:3.5.1.1)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CPE0_9BACT
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_41_12_curated
S_p1_S3_coassembly_k141_1942260_18
R_OD1_Wolfebacteria_45_10c, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

16895..18016
DNA (1122bp) protein (374aa)
Putative dehydrogenase Tax=Clostridium termitidis CT1112 RepID=S0FK22_9CLOT
putative dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_45_10c_curated
S_p1_S3_coassembly_k141_1942260_19
R_OD1_Wolfebacteria_41_13b, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(18181..18600)
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2EMC4_9BACT
glycerol-3-phosphate cytidyltransferase
Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_41_13b_curated
S_p1_S3_coassembly_k141_1942260_20
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(18648..19040)
DNA (393bp) protein (131aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00037570B3
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_1942260_21
R_SM2F11_46_24, SM2F11, Bacteria

Not on your lists

comp(19064..20509)
DNA (1446bp) protein (482aa)
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
S_p1_S3_coassembly_k141_1942260_22
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(20617..21075)
DNA (459bp) protein (153aa)
transcription elongation factor GreA; K03624 transcription elongation factor GreA bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
transcription elongation factor GreA
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_1942260_23
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(21221..21982)
DNA (762bp) protein (254aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase bin=GWA1_ZB2_49_26 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_1942260_24
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists

comp(21982..22653)
DNA (672bp) protein (224aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000313|EMBL:KKW44980.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
S_p1_S3_coassembly_k141_1942260_25
unknown

Not on your lists

comp(22725..23243)
DNA (519bp) protein (173aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1942260_26
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists


comp(23579..24850)
DNA (1272bp) protein (424aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
preprotein translocase subunit SecY
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_1942260_27
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists


comp(24914..25351)
DNA (438bp) protein (146aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003794552
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
S_p1_S3_coassembly_k141_1942260_28
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists


comp(25438..25902)
DNA (465bp) protein (155aa)
30S ribosomal protein S5 Tax=uncultured bacterium RepID=K1X247_9BACT
30S ribosomal protein S5
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_1942260_29
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists


comp(25985..26338)
DNA (354bp) protein (118aa)
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
50S ribosomal protein L18
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_1942260_30
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists


comp(26429..26977)
DNA (549bp) protein (183aa)
50S ribosomal protein L6 Tax=uncultured bacterium RepID=K1ZKJ6_9BACT
rplF; 50S ribosomal protein L6
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
Displaying items 1-30 of 69 in total

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