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S_p1_S3_coassembly_k141_2423034

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Displaying items 1-30 of 125 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2423034_1
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

3..1019
DNA (1017bp) protein (339aa)
Putative chaperone; K07391 magnesium chelatase family protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Mg chelatase-like protein
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_2423034_2
R_OD1_Wolfebacteria_42_16, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

1435..1620
DNA (186bp) protein (62aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Wolfebacteria_42_16_curated
S_p1_S3_coassembly_k141_2423034_3
R_OD1_Nomurabacteria_42_16, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1617..1862
DNA (246bp) protein (82aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_42_16_curated
S_p1_S3_coassembly_k141_2423034_4
unknown

Not on your lists

1970..2821
DNA (852bp) protein (284aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2423034_5
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(2946..3929)
DNA (984bp) protein (328aa)
Peptidase M23B bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
peptidase M23 family protein
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_2423034_6
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

4105..5961
DNA (1857bp) protein (619aa)
tjr:TherJR_0848 ATP-dependent DNA helicase PcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.1.-] bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
ATP-dependent DNA helicase PcrA
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_2423034_7
GWB1_OD1_45_9, Parcubacteria, Bacteria

Not on your lists


6115..6903
DNA (789bp) protein (263aa)
dimethyladenosine transferase (EC:2.1.1.48); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
dimethyladenosine transferase (EC:2.1.1.48)
Ribosomal RNA small subunit methyltransferase A {ECO:0000313|EMBL:KKU15080.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_45_9.;"
S_p1_S3_coassembly_k141_2423034_8
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists

6959..8950
DNA (1992bp) protein (664aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW45537.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
id=4731924 bin=GWC2_OD1_43_27 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
S_p1_S3_coassembly_k141_2423034_9
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists

8979..11216
DNA (2238bp) protein (746aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW45536.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
transmembrane_regions 44..66 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
S_p1_S3_coassembly_k141_2423034_10
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

11213..12394
DNA (1182bp) protein (394aa)
alias=gwe2_scaffold_360_77 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_2423034_11

Not on your lists

12443..12682
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL82069.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AbrB/MazE/MraZ-like bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
S_p1_S3_coassembly_k141_2423034_12
R_OD1_Giovannonibacteria_43_16, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

12685..13083
DNA (399bp) protein (133aa)
Death on curing protein, Doc toxin Tax=uncultured bacterium A1Q1_fos_493 RepID=L7W1K3_9BACT
death on curing protein
Tax=RIFCSPHIGHO2_02_OD1_Giovannonibacteria_43_16_curated
S_p1_S3_coassembly_k141_2423034_13

Not on your lists

13139..13633
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW16802.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_50_14.;"
alias=gwe2_scaffold_360_78 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
S_p1_S3_coassembly_k141_2423034_14
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

13717..14088
DNA (372bp) protein (124aa)
S23 ribosomal protein Tax=uncultured bacterium RepID=K2D0X0_9BACT
S23 ribosomal protein {ECO:0000313|EMBL:KKT92183.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
S23 ribosomal protein
S_p1_S3_coassembly_k141_2423034_15
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

14134..14796
DNA (663bp) protein (221aa)
Putative uncharacterized protein Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRY8_9BACT bin=ACD81 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_2423034_16
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

14846..16585
DNA (1740bp) protein (580aa)
Type IV secretory pathway VirB4 components-like protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Type IV secretory pathway VirB4 components-like protein
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_2423034_17
Scedosporium apiospermum, Scedosporium, Microascales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

16604..17356
DNA (753bp) protein (251aa)
Uncharacterized protein {ECO:0000313|EMBL:KEZ42562.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Microascales; Microascaceae; Scedosporium.;" source="Scedosporium apiospermum.;"
S_p1_S3_coassembly_k141_2423034_18
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

17388..18113
DNA (726bp) protein (242aa)
transmembrane_regions 7..29 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
S_p1_S3_coassembly_k141_2423034_19
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

18124..18504
DNA (381bp) protein (127aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037F6782
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_2423034_20
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

18509..19747
DNA (1239bp) protein (413aa)
transmembrane_regions 7..29 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_2423034_21
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(19807..20250)
DNA (444bp) protein (148aa)
single-stranded nucleic acid binding R3H domain-containing protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
single-stranded nucleic acid binding r3h
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_2423034_22
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(20213..20950)
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1X1N3_9BACT
60 kDa inner membrane insertion protein
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_2423034_23
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

21787..23169
DNA (1383bp) protein (461aa)
chromosomal replication initiator protein DnaA bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
dnaA; chromosomal replication initiator protein DnaA
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_2423034_24
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

23289..24401
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
DNA polymerase III subunit beta (EC:2.7.7.7)
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_2423034_25
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(24398..26827)
DNA (2430bp) protein (810aa)
1A family penicillin-binding protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
1A family penicillin-binding protein
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_2423034_26
unknown

Not on your lists

comp(26909..27091)
DNA (183bp) protein (61aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2423034_27
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(27161..27652)
DNA (492bp) protein (164aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
hypothetical protein Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI000369FC96
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
S_p1_S3_coassembly_k141_2423034_28
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

comp(27692..28279)
DNA (588bp) protein (196aa)
hypothetical protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
S_p1_S3_coassembly_k141_2423034_29
unknown

Not on your lists

comp(28366..29031)
DNA (666bp) protein (222aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2423034_30
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

29283..30959
DNA (1677bp) protein (559aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
type II secretion system protein E
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
Displaying items 1-30 of 125 in total

View Taxonomy