ggKbase home page

S_p1_S3_coassembly_k141_460209

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_460209_1
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


3..182
DNA (180bp) protein (60aa)
Translation initiation factor 2 subunit gamma Tax=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) RepID=IF2G_METM6
translation initiation factor IF-2 subunit gamma
Tax=BJP_IG2069_Methanobacteriales_33_27
S_p1_S3_coassembly_k141_460209_2
unknown

Not on your lists

252..605
DNA (354bp) protein (118aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_3
unknown

Not on your lists

677..1132
DNA (456bp) protein (152aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_4
unknown

Not on your lists

1142..1513
DNA (372bp) protein (124aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_5
unknown

Not on your lists

1552..1932
DNA (381bp) protein (127aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_6
unknown

Not on your lists

comp(1953..3548)
DNA (1596bp) protein (532aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_7
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(3622..3882)
DNA (261bp) protein (87aa)
Ribosomal protein L35AE/L33A Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WT03_9EURY
hypothetical protein
Tax=CG_Micra_03
S_p1_S3_coassembly_k141_460209_8
unknown

Not on your lists

comp(3907..4179)
DNA (273bp) protein (91aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_9

Not on your lists

comp(4179..6113)
DNA (1935bp) protein (645aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51261.1}; species="Archaea.;" source="archaeon GW2011_AR16.;"
Minimal nucleotidyltransferase fused to HEPN domain bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Minimal nucleotidyltransferase fused to HEPN protein
S_p1_S3_coassembly_k141_460209_10
unknown

Not on your lists

6253..6780
DNA (528bp) protein (176aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_11

Not on your lists

comp(6830..7705)
DNA (876bp) protein (292aa)
DNA polymerase beta domain protein region Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWJ4_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase beta protein
DNA polymerase beta protein {ECO:0000313|EMBL:AJF62996.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_460209_12

Not on your lists

comp(7736..9709)
DNA (1974bp) protein (658aa)
AP endonuclease family enzyme Tax=nanoarchaeote Nst1 RepID=R1G9P0_9ARCH bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
AP endonuclease family enzyme
AP endonuclease family enzyme {ECO:0000313|EMBL:AJF62999.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_460209_13
unknown

Not on your lists

comp(9703..9882)
DNA (180bp) protein (60aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_14
unknown

Not on your lists

comp(9946..10446)
DNA (501bp) protein (167aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_15
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(10533..10829)
DNA (297bp) protein (99aa)
DNA/RNA-binding protein Alba; K03622 archaea-specific DNA-binding protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA/RNA-binding protein albA
Tax=AR6
S_p1_S3_coassembly_k141_460209_16
Pyrobaculum calidifontis, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(10842..11033)
DNA (192bp) protein (64aa)
30S ribosomal protein S17e Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=RS17E_META3
rps17E; 30S ribosomal protein S17
30S ribosomal protein S17e {ECO:0000255|HAMAP-Rule:MF_00511}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum calidifontis (strain JCM 11548 / VA1).;"
S_p1_S3_coassembly_k141_460209_17
Thermoplasmatales archaeon BRNA1, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(11058..12026)
DNA (969bp) protein (323aa)
Transcription initiation factor IIB Tax=Thermoplasmatales archaeon BRNA1 RepID=M4YTY3_9EURY
Transcription initiation factor IIB (TFIIB)
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon BRNA1.;"
S_p1_S3_coassembly_k141_460209_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(12067..13260)
DNA (1194bp) protein (398aa)
Translation-associated GTPase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_460209_19
unknown

Not on your lists

13437..13793
DNA (357bp) protein (119aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_20
unknown

Not on your lists

14270..15529
DNA (1260bp) protein (420aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_21
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(15526..17361)
DNA (1836bp) protein (612aa)
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_460209_22
Methanocaldococcus villosus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

17471..18010
DNA (540bp) protein (180aa)
Putative signal transduction protein Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VRB9_9EURY
Putative signal transduction protein {ECO:0000313|EMBL:ENN96445.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus villosus KIN24-T80.;"
signal transduction protein with CBS domains
S_p1_S3_coassembly_k141_460209_23
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18015..18815)
DNA (801bp) protein (267aa)
Putative uncharacterized protein Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12X60_METBU
Uncharacterized protein {ECO:0000313|EMBL:AKB85566.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
hypothetical protein
S_p1_S3_coassembly_k141_460209_24
unknown

Not on your lists

comp(18821..19210)
DNA (390bp) protein (130aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_25
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

19298..20812
DNA (1515bp) protein (505aa)
Putative uncharacterized protein Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GV01_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Pacearch_02
S_p1_S3_coassembly_k141_460209_26
unknown

Not on your lists

20806..21543
DNA (738bp) protein (246aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_27
unknown

Not on your lists

21592..23208
DNA (1617bp) protein (539aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_28
unknown

Not on your lists

23208..23477
DNA (270bp) protein (90aa)

This feature has no annotations

S_p1_S3_coassembly_k141_460209_29
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

23597..24817
DNA (1221bp) protein (407aa)
glucosamine-fructose-6-phosphate aminotransferase isomerizing (EC:2.6.1.16)
glucosamine/fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=BJP_IG2102_PER_44_74
Displaying 29 items

View Taxonomy