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S_p1_S3_coassembly_k141_2004794

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2004794_1
unknown

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16..516
DNA (501bp) protein (167aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2004794_2

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571..933
DNA (363bp) protein (121aa)
Putative uncharacterized protein Tax=sediment metagenome RepID=D9PM40_9ZZZZ bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62933.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_2004794_3

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923..1486
DNA (564bp) protein (188aa)
DNA-directed RNA polymerase subunit E Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit E
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:AJF62934.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_2004794_4
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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1668..1976
DNA (309bp) protein (103aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376F1AE
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
RPS24A; ribosomal protein S24E
S_p1_S3_coassembly_k141_2004794_5

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1939..2121
DNA (183bp) protein (61aa)
30S ribosomal protein S27ae Tax=Archaea RepID=K0INM2_NITGG bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S27ae
30S ribosomal protein S27ae {ECO:0000313|EMBL:AJF62937.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_2004794_6
unknown

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2150..2566
DNA (417bp) protein (139aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2004794_7
unknown

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2715..3284
DNA (570bp) protein (190aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2004794_8

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3311..5497
DNA (2187bp) protein (729aa)
Elongation factor 2 Tax=Methanocaldococcus RepID=EF2_METJA bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 2
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_2004794_9
AR20, Woesearchaeaota, DPANN, Archaea

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5576..6889
DNA (1314bp) protein (438aa)
Elongation factor 1-alpha Tax=Methanocaldococcaceae RepID=EF1A_METJA bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 1-alpha
Tax=AR20
S_p1_S3_coassembly_k141_2004794_10
unknown

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6945..7325
DNA (381bp) protein (127aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2004794_11
AR20, Woesearchaeaota, DPANN, Archaea

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7325..7723
DNA (399bp) protein (133aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037665D4
30S ribosomal protein S10
Tax=AR20
S_p1_S3_coassembly_k141_2004794_12
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

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comp(7696..8475)
DNA (780bp) protein (260aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003719623
hypothetical protein
Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
S_p1_S3_coassembly_k141_2004794_13
AR18, Woesearchaeaota, DPANN, Archaea

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8576..8980
DNA (405bp) protein (135aa)
Uncharacterized protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
S_p1_S3_coassembly_k141_2004794_14
AR20, Woesearchaeaota, DPANN, Archaea

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comp(8970..9272)
DNA (303bp) protein (101aa)
Ribonuclease P protein component 4 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HGC9_METFS bin=GW2011_AR20_complete species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribonuclease P protein component 4
Tax=AR20
S_p1_S3_coassembly_k141_2004794_15
unknown

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comp(9288..9557)
DNA (270bp) protein (90aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2004794_16
unknown

Not on your lists

comp(9529..9768)
DNA (240bp) protein (80aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2004794_17
unknown

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9826..10110
DNA (285bp) protein (95aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2004794_18

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10146..10670
DNA (525bp) protein (175aa)
50S ribosomal protein L10e Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DS36_METV3 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L10e
50S ribosomal protein L10e {ECO:0000313|EMBL:AJF62900.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_2004794_19

Not on your lists

10713..11861
DNA (1149bp) protein (383aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; species="Archaea.;" source="archaeon GW2011_AR19.;"
Phosphoenolpyruvate synthase Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VTD5_METIM
phosphoenolpyruvate synthase
S_p1_S3_coassembly_k141_2004794_20
unknown

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11961..12365
DNA (405bp) protein (135aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2004794_21
unknown

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12380..12688
DNA (309bp) protein (103aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2004794_22

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comp(12691..13491)
DNA (801bp) protein (267aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50909.1}; species="Archaea.;" source="archaeon GW2011_AR16.;"
DNA polymerase beta domain protein region (Fragment) bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA polymerase beta protein
S_p1_S3_coassembly_k141_2004794_23
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(13539..15428)
DNA (1890bp) protein (630aa)
Putative uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_2004794_24
unknown

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comp(15425..15931)
DNA (507bp) protein (169aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2004794_25
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

16032..16328
DNA (297bp) protein (99aa)
hypothetical protein Tax=Dietzia alimentaria RepID=UPI00029B04DA
Tax=AR17
S_p1_S3_coassembly_k141_2004794_26

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comp(16329..18290)
DNA (1962bp) protein (654aa)
PGAP1 family protein {ECO:0000313|EMBL:KHO53024.1}; species="Archaea.;" source="archaeon GW2011_AR13.;"
PGAP1 family protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S_p1_S3_coassembly_k141_2004794_27
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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comp(18321..19406)
DNA (1086bp) protein (362aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=SYW_AERPE
Tax=RBG_13_Pacearchaeota_33_26_curated
Displaying 27 items

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