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S_p1_S3_coassembly_k141_133335

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_133335_1
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..905)
DNA (903bp) protein (301aa)
ArsR family transcriptional regulator Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQA3_MYXFH
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AEI65432.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
S_p1_S3_coassembly_k141_133335_2
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1900..2334)
DNA (435bp) protein (145aa)
Putative uncharacterized protein Tax=Beggiatoa sp. PS RepID=A7C3E8_9GAMM
Tax=RBG_16_Deltaproteobacteria_49_23_curated
S_p1_S3_coassembly_k141_133335_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2793..5405
DNA (2613bp) protein (871aa)
ATP-dependent Clp protease ATP-binding protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035C31A6
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ATPase
S_p1_S3_coassembly_k141_133335_4
Pseudomonas sp. 21, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5478..6674)
DNA (1197bp) protein (399aa)
PREDICTED: probable medium-chain specific acyl-CoA dehydrogenase 10, mitochondrial-like Tax=Pantholops hodgsonii RepID=UPI0003C14285
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KJK03124.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 21.;"
hypothetical protein
S_p1_S3_coassembly_k141_133335_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7382..9001
DNA (1620bp) protein (540aa)
AMP-binding enzyme family protein Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ABN2_CARHZ
Acyl-CoA synthetase {ECO:0000313|EMBL:ETX03257.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
AMP-binding protein
S_p1_S3_coassembly_k141_133335_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9087..10205
DNA (1119bp) protein (373aa)
Glutamate dehydrogenase, NAD-dependent Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A571_PELCD
gdhB; glutamate dehydrogenase, NAD-dependent
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
S_p1_S3_coassembly_k141_133335_7
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10275..11210
DNA (936bp) protein (312aa)
Probable pyruvate synthase, gamma subunit Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ANZ6_DESPS
pyruvate synthase, gamma subunit
Tax=RBG_16_Betaproteobacteria_66_20_curated
S_p1_S3_coassembly_k141_133335_8
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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11207..12427
DNA (1221bp) protein (407aa)
2-oxoacid:ferredoxin oxidoreductase, alpha subunit Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A569_PELCD
Pyruvate synthase {ECO:0000313|EMBL:GAO35112.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
2-oxoacid:ferredoxin oxidoreductase subunit alpha
S_p1_S3_coassembly_k141_133335_9
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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12495..13418
DNA (924bp) protein (308aa)
Related to pyruvate synthase, subunit PorB Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ANZ4_DESPS
pyruvate synthase, subunit PorB
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
S_p1_S3_coassembly_k141_133335_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(13680..14756)
DNA (1077bp) protein (359aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Natrialba asiatica genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
S_p1_S3_coassembly_k141_133335_11
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14965..16707)
DNA (1743bp) protein (581aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003678447
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
S_p1_S3_coassembly_k141_133335_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16854..17966)
DNA (1113bp) protein (371aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S_p1_S3_coassembly_k141_133335_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17963..19288)
DNA (1326bp) protein (442aa)
Uncharacterized protein Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CQP8_SPHYA
CaiB/BaiF family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S_p1_S3_coassembly_k141_133335_14
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(19487..19924)
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EHD9_9CHLR
cytochrome c family protein
Tax=GWC2_Nitrospirae_57_9_curated
S_p1_S3_coassembly_k141_133335_15
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

20002..20271
DNA (270bp) protein (90aa)
Putative uncharacterized protein Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DMB9_9GAMM
cytochrome c, mono- and diheme variants family
Tax=GWC2_Nitrospirae_57_9_curated
S_p1_S3_coassembly_k141_133335_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20321..20962)
DNA (642bp) protein (214aa)
Putative uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
S_p1_S3_coassembly_k141_133335_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21090..21854)
DNA (765bp) protein (255aa)
Hypothetical membrane protein bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
cytochrome c biogenesis protein, transmembrane region
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S_p1_S3_coassembly_k141_133335_18
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21879..22310)
DNA (432bp) protein (144aa)
PROKAR_LIPOPROTEIN bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
S_p1_S3_coassembly_k141_133335_19

Not on your lists

comp(22307..22948)
DNA (642bp) protein (214aa)
Uncharacterized protein Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RTR1_SPITD
Uncharacterized protein {ECO:0000313|EMBL:KKL87615.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S_p1_S3_coassembly_k141_133335_20
unknown

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comp(23014..23262)
DNA (249bp) protein (83aa)

This feature has no annotations

S_p1_S3_coassembly_k141_133335_21
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23345..23617)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQ20_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS70116.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S_p1_S3_coassembly_k141_133335_22
R_RIF_OD1_03_53_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(23637..24092)
DNA (456bp) protein (152aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_53_11_curated
S_p1_S3_coassembly_k141_133335_23
R_OD1_Wolfebacteria_42_16, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(24111..24911)
DNA (801bp) protein (267aa)
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
cytochrome c biogenesis protein, transmembrane region
Tax=RIFCSPHIGHO2_02_FULL_OD1_Wolfebacteria_42_16_curated
S_p1_S3_coassembly_k141_133335_24

Not on your lists

comp(24925..25482)
DNA (558bp) protein (186aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU83353.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_8b.;"
Hypothetical conserved protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
S_p1_S3_coassembly_k141_133335_25
uncultured delta proteobacterium HF0200_39L23, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25514..26089)
DNA (576bp) protein (192aa)
alkyl hydroperoxide reductase Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000287F670
Thiol-disulfide isomerase and thioredoxins {ECO:0000313|EMBL:ADI19268.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; environmental samples.;" source="uncultured delta proteobacterium HF0200_39L23.;"
ccmG; periplasmic thioredoxin (cytochrome c biogenesis)
S_p1_S3_coassembly_k141_133335_26
unknown

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comp(26310..26714)
DNA (405bp) protein (135aa)

This feature has no annotations

S_p1_S3_coassembly_k141_133335_27
unknown

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comp(26758..26904)
DNA (147bp) protein (49aa)

This feature has no annotations

S_p1_S3_coassembly_k141_133335_28
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26907..27143)
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=root RepID=D6CTN4_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ88653.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
S_p1_S3_coassembly_k141_133335_29
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(27329..27535)
DNA (207bp) protein (69aa)
Histidine kinase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZX19_OPITP
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACB75130.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
S_p1_S3_coassembly_k141_133335_30
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27645..28331)
DNA (687bp) protein (229aa)
DNA methyltransferase Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NC45_DESAR
DNA methyltransferase
DNA methyltransferase {ECO:0000313|EMBL:AEB08840.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
Displaying items 1-30 of 46 in total

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