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S_p1_S3_coassembly_k141_27708

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Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_27708_1
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..243)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Ralstonia sp. AU12-08 RepID=S9RQR4_9RALS
hypothetical protein
Tax=RBG_16_Desulfobacca_60_12_curated
S_p1_S3_coassembly_k141_27708_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(338..742)
DNA (405bp) protein (135aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_27708_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(773..1165)
DNA (393bp) protein (131aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_27708_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1248..1922)
DNA (675bp) protein (225aa)
TenA family transcriptional regulator (EC:3.5.99.2); K03707 thiaminase (transcriptional activator TenA) [EC:3.5.99.2] bin=bin3_NC10 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
TenA family transcriptional activator
Tax=CSP1_5_NC10
S_p1_S3_coassembly_k141_27708_5
Leptospira interrogans, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1987..2847)
DNA (861bp) protein (287aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EKR54413.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EKR54413.1};; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira interrogans str. UI 12758.;"
phosphomethylpyrimidine kinase Tax=Leptospira interrogans RepID=UPI000349B3B2
thiD; phosphomethylpyrimidine kinase protein
S_p1_S3_coassembly_k141_27708_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2858..3835)
DNA (978bp) protein (326aa)
ABC transporter substrate-binding protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B38953
Uncharacterized protein {ECO:0000313|EMBL:ETX04513.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
S_p1_S3_coassembly_k141_27708_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3845..4756)
DNA (912bp) protein (304aa)
ABC transporter permease Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B33919
Uncharacterized protein {ECO:0000313|EMBL:ETX04512.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
binding-protein-dependent transport system inner membrane protein
S_p1_S3_coassembly_k141_27708_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4746..5519)
DNA (774bp) protein (258aa)
ABC transporter ATP-binding protein Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I9Z9_AZOC5
Uncharacterized protein {ECO:0000313|EMBL:ETW94881.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ABC transporter ATP-binding protein
S_p1_S3_coassembly_k141_27708_9
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6146..6544
DNA (399bp) protein (133aa)
chemotaxis protein CheY Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00036235E5
response regulator receiver protein
Chemotaxis protein CheY {ECO:0000313|EMBL:KFF49818.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
S_p1_S3_coassembly_k141_27708_10
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6541..7488
DNA (948bp) protein (316aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026257D2
HemK family modification methylase
S_p1_S3_coassembly_k141_27708_11
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8329..8616)
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YAG2_9BACT
phage associated protein
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_42_43_curated
S_p1_S3_coassembly_k141_27708_12
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8582..8869)
DNA (288bp) protein (96aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_52_8 species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
pANL56
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_10_curated
S_p1_S3_coassembly_k141_27708_13
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9042..10067
DNA (1026bp) protein (342aa)
Bacterial capsule synthesis protein PGA_cap family protein Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HME5_ACHXA
capsule synthesis protein PGA_cap family protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S_p1_S3_coassembly_k141_27708_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10129..10893
DNA (765bp) protein (255aa)
Uncharacterized protein Tax=Alcanivorax sp. PN-3 RepID=U7HMQ5_9GAMM
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
S_p1_S3_coassembly_k141_27708_15
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10962..12317)
DNA (1356bp) protein (452aa)
hypothetical protein Tax=Wenxinia marina RepID=UPI000373D549
Wenxma_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ70133.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
2-methylcitrate dehydratase
S_p1_S3_coassembly_k141_27708_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12353..13588)
DNA (1236bp) protein (412aa)
PREDICTED: probable medium-chain specific acyl-CoA dehydrogenase 10, mitochondrial-like Tax=Pantholops hodgsonii RepID=UPI0003C14285
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
S_p1_S3_coassembly_k141_27708_17
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13770..15257)
DNA (1488bp) protein (496aa)
Binding-protein-dependent transport system inner membrane protein Tax=Marinobacter lipolyticus SM19 RepID=R8B1V3_9ALTE
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
S_p1_S3_coassembly_k141_27708_18
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15290..15946)
DNA (657bp) protein (219aa)
ABC transporter Tax=Leucothrix mucor RepID=UPI0003B39347
ABC transporter related protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
S_p1_S3_coassembly_k141_27708_19
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15946..16803)
DNA (858bp) protein (286aa)
Hypothetical ABC-type phosphate/phosphonate transport system, periplasmic component Tax=Thalassolituus oleivorans MIL-1 RepID=M5DTT2_9GAMM
hypothetical ABC-type phosphate/phosphonate transport system, periplasmic component
Hypothetical ABC-type phosphate/phosphonate transport system, periplasmic component {ECO:0000313|EMBL:CCU72623.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolituus oleivorans MIL-1.;"
S_p1_S3_coassembly_k141_27708_20
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17128..18897)
DNA (1770bp) protein (590aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI000369BC72
Putative uncharacterized protein {ECO:0000313|EMBL:CBX27100.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
eriC1; protein EriC1
S_p1_S3_coassembly_k141_27708_21
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

comp(18848..19558)
DNA (711bp) protein (237aa)
PTS IIA-like nitrogen-regulatory protein PtsN bin=GWB1_Spirochaetales_60_80 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes
PTS fructose transporter subunit IIA
Tax=GWB1_Spirochaetes_60_80_curated
S_p1_S3_coassembly_k141_27708_22
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19797..21662)
DNA (1866bp) protein (622aa)
Predicted hydrolase bin=GWB2_Geobacter-like_52_12 species=Vibrio vulnificus genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
sulfatase
Tax=GWB2_Geobacteraceae_52_12_curated
S_p1_S3_coassembly_k141_27708_23
unknown

Not on your lists

21925..22638
DNA (714bp) protein (238aa)

This feature has no annotations

S_p1_S3_coassembly_k141_27708_24
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

22705..25707
DNA (3003bp) protein (1001aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI000372881E
outer membrane adhesin-like protein
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_27708_25
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25792..26355
DNA (564bp) protein (188aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWC2_Geobacteraceae_58_44_curated
S_p1_S3_coassembly_k141_27708_26
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26784..27863
DNA (1080bp) protein (360aa)
tartrate dehydrogenase (EC:4.1.1.73)
Tartrate dehydrogenase Tax=Caenispirillum salinarum AK4 RepID=K9HGD1_9PROT
Tartrate dehydrogenase {ECO:0000313|EMBL:KJB97482.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
S_p1_S3_coassembly_k141_27708_27
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

28166..28690
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Bordetella RepID=V8U3B0_BORPT
reductase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
S_p1_S3_coassembly_k141_27708_28
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28709..29065
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=Bordetella RepID=V8U3B0_BORPT
Putative N-acetyltransferase YedL {ECO:0000313|EMBL:KCV59112.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
reductase
S_p1_S3_coassembly_k141_27708_29
unknown

Not on your lists

29181..29309
DNA (129bp) protein (43aa)

This feature has no annotations

S_p1_S3_coassembly_k141_27708_30
Exophiala oligosperma, Exophiala, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

Not on your lists

comp(29414..30640)
DNA (1227bp) protein (409aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
hypothetical protein Tax=Amycolatopsis alba RepID=UPI000360D8EB
Strain CBS 72588 unplaced genomic scaffold supercont1.6, whole genome shotgun sequence {ECO:0000313|EMBL:KIW41470.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Exophiala.;" source="Exophiala oligosperma.;"
Displaying items 1-30 of 71 in total

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