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S_p1_S3_coassembly_k141_3442

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_3442_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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225..1628
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit bin=GWC2_Methylomirabilis_70_16 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
leuC; alpha-IPM isomerase
Tax=GWC2_Rokubacteria_70_16_curated
S_p1_S3_coassembly_k141_3442_2
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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1731..3134
DNA (1404bp) protein (468aa)
3-isopropylmalate dehydratase large subunit bin=GWC2_Methylomirabilis_70_16 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
leuC; alpha-IPM isomerase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S_p1_S3_coassembly_k141_3442_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3136..3744
DNA (609bp) protein (203aa)
3-isopropylmalate dehydratase small subunit bin=GWC2_Methylomirabilis_70_24 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
leuD; isopropylmalate isomerase small subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
S_p1_S3_coassembly_k141_3442_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4685..6283
DNA (1599bp) protein (533aa)
ABC transporter peptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter peptide-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_3442_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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6364..7413
DNA (1050bp) protein (350aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
S_p1_S3_coassembly_k141_3442_6
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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7525..7809
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM42714.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
S_p1_S3_coassembly_k141_3442_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7831..8064
DNA (234bp) protein (78aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_3442_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8182..9231
DNA (1050bp) protein (350aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S_p1_S3_coassembly_k141_3442_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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9301..10350
DNA (1050bp) protein (350aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
S_p1_S3_coassembly_k141_3442_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10402..10887)
DNA (486bp) protein (162aa)
Formamidopyrimidine-DNA glycosylase Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IHM5_9BRAD
MaoC family dehydratase {ECO:0000313|EMBL:ETX08035.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
putative monoamine oxidase regulatory protein
S_p1_S3_coassembly_k141_3442_11
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11024..11485)
DNA (462bp) protein (154aa)
peptide ABC transporter substrate-binding protein Tax=Bradyrhizobium japonicum RepID=UPI00036DF7C8
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR76115.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
peptide ABC transporter substrate-binding protein
S_p1_S3_coassembly_k141_3442_12
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11928..13817
DNA (1890bp) protein (630aa)
CRISPR-associated helicase Cas3 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UQQ9_MYXSD
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:EYF05349.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
CRISPR-associated helicase Cas3
Displaying 12 items

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