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S_p1_S3_coassembly_k141_47521

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_47521_1
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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432..4901
DNA (4470bp) protein (1490aa)
Uncharacterized protein Tax=Gammaproteobacteria RepID=B0VEF9_ACIBY
hypothetical protein
Biofilm-associated protein {ECO:0000313|EMBL:ABX00640.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumannii.;"
S_p1_S3_coassembly_k141_47521_2
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5076..6425)
DNA (1350bp) protein (450aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003784FF9
putative acyl-CoA transferase/carnitine dehydratase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S_p1_S3_coassembly_k141_47521_3
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6659..7858)
DNA (1200bp) protein (400aa)
formyl-CoA transferase (EC:2.8.3.16)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003604D7E
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S_p1_S3_coassembly_k141_47521_4
unknown

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7860..8018
DNA (159bp) protein (53aa)

This feature has no annotations

S_p1_S3_coassembly_k141_47521_5
unknown

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8568..8828
DNA (261bp) protein (87aa)

This feature has no annotations

S_p1_S3_coassembly_k141_47521_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

9207..9821
DNA (615bp) protein (205aa)
Transcriptional regulator, GntR family Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZJ2_RUBXD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABG03186.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
S_p1_S3_coassembly_k141_47521_7
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10078..11430)
DNA (1353bp) protein (451aa)
Putative enzyme of poly-gamma-glutamate biosynthesis (Capsule formation) Tax=Rhizobium sp. CF080 RepID=J2S289_9RHIZ
Capsule synthesis protein, CapA {ECO:0000313|EMBL:EUB99454.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
capsule synthesis CapA-like protein
S_p1_S3_coassembly_k141_47521_8
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11797..12006)
DNA (210bp) protein (70aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035EE9BE
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S_p1_S3_coassembly_k141_47521_9
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12066..13247)
DNA (1182bp) protein (394aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000371244A
acyl-CoA dehydrogenase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S_p1_S3_coassembly_k141_47521_10
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(13328..14596)
DNA (1269bp) protein (423aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000381D05C
acyl-CoA dehydrogenase
Tax=RBG_16_NC10_65_8_curated
S_p1_S3_coassembly_k141_47521_11
unknown

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comp(14859..15131)
DNA (273bp) protein (91aa)

This feature has no annotations

S_p1_S3_coassembly_k141_47521_12
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15210..15713)
DNA (504bp) protein (168aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000379EF20
Acyl dehydratase {ECO:0000313|EMBL:KDR40948.1}; MaoC family protein {ECO:0000313|EMBL:CDY73628.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein
S_p1_S3_coassembly_k141_47521_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(15740..16306)
DNA (567bp) protein (189aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036788D1
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p1_S3_coassembly_k141_47521_14
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16383..17597)
DNA (1215bp) protein (405aa)
hypothetical protein, partial Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000374F775
4-hydroxy-2-ketovalerate aldolase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S_p1_S3_coassembly_k141_47521_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18065..18829)
DNA (765bp) protein (255aa)
alpha/beta hydrolase Tax=Bradyrhizobium elkanii RepID=UPI0002E615A1
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
S_p1_S3_coassembly_k141_47521_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(18925..20187)
DNA (1263bp) protein (421aa)
Formyl-CoA transferase (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16] bin=bin8_Chloro species=Synergistes sp. 3_1_syn1 genus=Synergistes taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p1_S3_coassembly_k141_47521_17
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20449..20619
DNA (171bp) protein (57aa)
UPI0003CFB664 related cluster Tax=unknown RepID=UPI0003CFB664
Uncharacterized protein {ECO:0000313|EMBL:ESZ20122.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
S_p1_S3_coassembly_k141_47521_18
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20616..21137
DNA (522bp) protein (174aa)
Uncharacterized protein Tax=Saccharomonospora RepID=H8G992_9PSEU
Membrane protein {ECO:0000313|EMBL:KDN76071.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
integral membrane protein
S_p1_S3_coassembly_k141_47521_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21875..23431
DNA (1557bp) protein (519aa)
ABC transporter Tax=Oligotropha carboxidovorans RepID=B6JI50_OLICO
ABC transporter
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:EFI52717.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
S_p1_S3_coassembly_k141_47521_20
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23692..25257
DNA (1566bp) protein (522aa)
ABC transporter Tax=Oligotropha carboxidovorans RepID=B6JI50_OLICO
ABC transporter
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:AEI06662.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
S_p1_S3_coassembly_k141_47521_21
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25343..26992)
DNA (1650bp) protein (550aa)
Thiamine pyrophosphate protein bin=GWC2_Syntrophobacterales_56_13 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
thiamine pyrophosphate protein central region
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S_p1_S3_coassembly_k141_47521_22
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27084..28316)
DNA (1233bp) protein (411aa)
formyl-CoA transferase (EC:2.8.3.16)
hypothetical protein Tax=Paenibacillus fonticola RepID=UPI0003605031
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S_p1_S3_coassembly_k141_47521_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28613..29728
DNA (1116bp) protein (372aa)
nitrilase (EC:3.5.5.1)
Carbon-nitrogen hydrolase family protein bin=GWC2_Methylomirabilis_70_16 species=Sphingomonas sp. S17 genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S_p1_S3_coassembly_k141_47521_24
unknown

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30148..30213
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 24 items

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