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S_p1_S3_coassembly_k141_317589

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Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_317589_1
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..796
DNA (795bp) protein (265aa)
ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
ferrochelatase Tax=Synechococcus sp. CB0101 RepID=UPI0002002415
S_p1_S3_coassembly_k141_317589_2
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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933..1415
DNA (483bp) protein (161aa)
Uncharacterized protein family UPF0310 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q312I8_DESDG
hypothetical protein
Uncharacterized protein family UPF0310 {ECO:0000313|EMBL:ABB38158.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans; (strain G20)).;"
S_p1_S3_coassembly_k141_317589_3
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1450..2379
DNA (930bp) protein (310aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Molybdopterin-guanine dinucleotide biosynthesis protein A-like protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX48_PSEUX
molybdopterin-guanine dinucleotide biosynthesis protein A-like protein
S_p1_S3_coassembly_k141_317589_4
unknown

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2553..3857
DNA (1305bp) protein (435aa)

This feature has no annotations

S_p1_S3_coassembly_k141_317589_5
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4218..4715
DNA (498bp) protein (166aa)
Molecular chaperone Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LPJ6_SYNAS
molecular chaperone
Molecular chaperone {ECO:0000313|EMBL:ABC75930.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
S_p1_S3_coassembly_k141_317589_6
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

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4817..5314
DNA (498bp) protein (166aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2D303_9BACT
heat shock protein Hsp20 family protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
S_p1_S3_coassembly_k141_317589_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6001..7602
DNA (1602bp) protein (534aa)
ABC transporter peptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_317589_8
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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7727..8005
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Sphingobium baderi LL03 RepID=T0HLG4_9SPHN
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
S_p1_S3_coassembly_k141_317589_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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8075..8257
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX00745.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
S_p1_S3_coassembly_k141_317589_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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8297..9361
DNA (1065bp) protein (355aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Natrialba asiatica genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
S_p1_S3_coassembly_k141_317589_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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9450..10838
DNA (1389bp) protein (463aa)
2-methylcitrate dehydratase Tax=Enterobacter cloacae RepID=UPI0002EB6108
2-methylcitrate dehydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S_p1_S3_coassembly_k141_317589_12
uncultured Rhizobiales bacterium HF4000_48A13, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11046..11843
DNA (798bp) protein (266aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; environmental samples.;" source="uncultured Rhizobiales bacterium HF4000_48A13.;"
Dihydroxynaphthoic acid synthase Tax=uncultured Rhizobiales bacterium HF4000_48A13 RepID=E0XZ50_9RHIZ
naphthoate synthase
S_p1_S3_coassembly_k141_317589_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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12044..12589
DNA (546bp) protein (182aa)
ATP-dependent Clp protease proteolytic subunit Tax=uncultured bacterium RepID=K2F4J1_9BACT
Protease subunit of ATP-dependent Clp protease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
S_p1_S3_coassembly_k141_317589_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12829..15066
DNA (2238bp) protein (746aa)
Putative acyl-CoA transferase/carnitine dehydratase Tax=Burkholderia sp. BT03 RepID=J2IZA0_9BURK
putative acyl-coA transferase/carnitine dehydratase precursor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S_p1_S3_coassembly_k141_317589_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15115..16029
DNA (915bp) protein (305aa)
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
DNA-formamidopyrimidine glycosylase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
S_p1_S3_coassembly_k141_317589_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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16387..17721
DNA (1335bp) protein (445aa)
Amidohydrolase bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase
Tax=GWA2_Rokubacteria_73_35_curated
S_p1_S3_coassembly_k141_317589_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17817..18878
DNA (1062bp) protein (354aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Natrialba asiatica genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_317589_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19002..20063
DNA (1062bp) protein (354aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW97358.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
N5,N10-methylenetetrahydromethanopterin reductase protein bin=GWA2_Elusimicrobia_69_24 species=uncultured bacterium CSL144 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
N5,N10-methylene tetrahydromethanopterin reductase
S_p1_S3_coassembly_k141_317589_19
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20129..21487
DNA (1359bp) protein (453aa)
hypothetical protein
Putative uncharacterized protein bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S_p1_S3_coassembly_k141_317589_20
unknown

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comp(21575..22573)
DNA (999bp) protein (333aa)

This feature has no annotations

S_p1_S3_coassembly_k141_317589_21
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22949..24538
DNA (1590bp) protein (530aa)
peptide ABC transporter substrate-binding protein Tax=Bradyrhizobium elkanii RepID=UPI000308F0E8
ABC transporter peptide-binding protein {ECO:0000313|EMBL:AHY55324.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
peptide ABC transporter substrate-binding protein
S_p1_S3_coassembly_k141_317589_22
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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24939..25892
DNA (954bp) protein (318aa)
peptide ABC transporter permease Tax=Bradyrhizobium elkanii RepID=UPI0002D51244
Peptide ABC transporter permease {ECO:0000313|EMBL:ETR76113.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
peptide ABC transporter permease
S_p1_S3_coassembly_k141_317589_23
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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26082..26978
DNA (897bp) protein (299aa)
Peptide ABC transporter permease protein Tax=Bradyrhizobium sp. S23321 RepID=I0GGV5_9BRAD
peptide ABC transporter permease
Peptide ABC transporter permease protein {ECO:0000313|EMBL:BAL79992.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
S_p1_S3_coassembly_k141_317589_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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27170..28219
DNA (1050bp) protein (350aa)
peptide ABC transporter ATP-binding protein Tax=Elioraea tepidiphila RepID=UPI00036E947E
oligopeptide ABC transporter ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
S_p1_S3_coassembly_k141_317589_25
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28223..29212
DNA (990bp) protein (330aa)
Peptide ABC transporter ATP-binding protein Tax=alpha proteobacterium BAL199 RepID=A8TPE8_9PROT
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR76110.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein
S_p1_S3_coassembly_k141_317589_26
unknown

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comp(29357..30307)
DNA (951bp) protein (317aa)

This feature has no annotations

S_p1_S3_coassembly_k141_317589_27
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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30572..31540
DNA (969bp) protein (323aa)
2-nitropropane dioxygenase NPD Tax=Oceanibaculum indicum P24 RepID=K2K5T3_9PROT
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:EKE78219.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
2-nitropropane dioxygenase NPD
S_p1_S3_coassembly_k141_317589_28
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(31691..32878)
DNA (1188bp) protein (396aa)
hypothetical protein Tax=Martelella mediterranea RepID=UPI00036217C3
CoA-transferase {ECO:0000313|EMBL:ETR76211.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
S_p1_S3_coassembly_k141_317589_29
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(33060..33434)
DNA (375bp) protein (125aa)
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ABM58708.1}; EC=4.1.1.44 {ECO:0000313|EMBL:ABM58708.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
4-carboxymuconolactone decarboxylase Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WM51_VEREI
4-carboxymuconolactone decarboxylase
S_p1_S3_coassembly_k141_317589_30
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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comp(33520..34071)
DNA (552bp) protein (184aa)
Carboxymuconolactone decarboxylase Tax=Pseudomonas putida HB3267 RepID=L0FHV7_PSEPU
carboxymuconolactone decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying items 1-30 of 68 in total

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