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S_p1_S3_coassembly_k141_406788

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_406788_1
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1035)
DNA (1035bp) protein (345aa)
TPR domain-containing protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002629204
TPR repeat {ECO:0000313|EMBL:EDP65156.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
TPR domain protein
S_p1_S3_coassembly_k141_406788_2
unknown

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comp(1256..2101)
DNA (846bp) protein (282aa)

This feature has no annotations

S_p1_S3_coassembly_k141_406788_3
Leptospira licerasiae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2113..2868)
DNA (756bp) protein (252aa)
GAF domain / histidine kinase A domain / GHKL domain / response regulator receiver domain multi-domain protein Tax=Leptospira licerasiae RepID=I0XSQ0_9LEPT
GAF domain / histidine kinase A domain / GHKL domain / response regulator receiver domain multi-domain protein {ECO:0000313|EMBL:EIE01908.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira licerasiae serovar Varillal str. VAR 010.;"
chemotaxis response regulator
S_p1_S3_coassembly_k141_406788_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3673..4701
DNA (1029bp) protein (343aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037FF7D0
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S_p1_S3_coassembly_k141_406788_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4817..6739
DNA (1923bp) protein (641aa)
TRAP transporter, 4TM/12TM fusion protein Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DEB1_9GAMM
C4-dicarboxylate ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S_p1_S3_coassembly_k141_406788_trna_1
unknown

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6909..6981
DNA (73bp)
transferRNA Val
S_p1_S3_coassembly_k141_406788_6
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

7314..8084
DNA (771bp) protein (257aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8G8_SPHTD
hypothetical protein
Tax=RBG_16_Caldithrix_48_16_curated
S_p1_S3_coassembly_k141_406788_7
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8219..9055
DNA (837bp) protein (279aa)
cheR; chemotaxis protein CheR (EC:2.1.1.80)
CheR methyltransferase, SAM binding domain {ECO:0000313|EMBL:ABF86029.1}; EC=2.1.1.80 {ECO:0000313|EMBL:ABF86029.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
CheR methyltransferase, SAM binding domain Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CWK7_MYXXD
S_p1_S3_coassembly_k141_406788_8
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(9150..10256)
DNA (1107bp) protein (369aa)
hypothetical protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628379
RTX toxins and related Ca2+-binding protein
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_406788_9
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(10651..11601)
DNA (951bp) protein (317aa)
hypothetical protein bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
S_p1_S3_coassembly_k141_406788_10
Caldithrix abyssi, Caldithrix, Bacteria

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11713..14424
DNA (2712bp) protein (904aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
Alanine--tRNA ligase Tax=Caldithrix abyssi DSM 13497 RepID=H1XX74_9BACT
alaS; alanyl-tRNA synthetase
S_p1_S3_coassembly_k141_406788_11
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

14744..15331
DNA (588bp) protein (196aa)
PF09835 family protein Tax=Leptospira inadai serovar Lyme str. 10 RepID=V6H8C1_9LEPT
hypothetical protein
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_406788_12
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15252..16346)
DNA (1095bp) protein (365aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI0003825CD6
GTPase obg
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
S_p1_S3_coassembly_k141_406788_13
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(16450..18771)
DNA (2322bp) protein (774aa)
Tetratricopeptide TPR_1 repeat-containing protein Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XU76_STAC7
Tetratricopeptide TPR_1 repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
S_p1_S3_coassembly_k141_406788_14
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18948..19784)
DNA (837bp) protein (279aa)
Methyltransferase type 11 Tax=Frankia sp. CN3 RepID=G6HBG3_9ACTO
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EIV94341.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
methyltransferase type 11
S_p1_S3_coassembly_k141_406788_15
uncultured delta proteobacterium HF0070_15B21, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19866..20645
DNA (780bp) protein (260aa)
flagellar basal body rod protein FlgF Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626B28
Flagellar basal body rod protein {ECO:0000313|EMBL:ADI19086.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; environmental samples.;" source="uncultured delta proteobacterium HF0070_15B21.;"
flagellar basal body rod protein
S_p1_S3_coassembly_k141_406788_16
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

20701..21486
DNA (786bp) protein (262aa)
flagellar basal body rod protein FlgG Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626B27
flgG; flagellar basal body rod protein FlgG
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_406788_17
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

21502..22638
DNA (1137bp) protein (379aa)
flagella basal body P-ring formation protein FlgA Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626B26
FlgA family protein
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_406788_18
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

22686..23468
DNA (783bp) protein (261aa)
Putative uncharacterized protein Tax=uncultured delta proteobacterium HF0070_15B21 RepID=E0XXE2_9DELT
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_406788_19
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

23518..24741
DNA (1224bp) protein (408aa)
Flagellar P-ring protein Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQC1_RHOCS
flgI; flagellar P-ring protein FlgI
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_406788_20
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24754..25134
DNA (381bp) protein (127aa)
Flagellar rod-binding protein FlgJ Tax=Geobacter sulfurreducens RepID=D7AEI8_GEOSK
Flagellar rod assembly protein FlgJ {ECO:0000313|EMBL:AJY69291.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
flgJ; flagellar rod-binding protein FlgJ
S_p1_S3_coassembly_k141_406788_21
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

25323..25628
DNA (306bp) protein (102aa)
Putative anti-sigma-28 factor, FlgM Tax=Leptospirillum sp. Group IV 'UBA BS' RepID=T0XZJ5_9BACT
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_406788_22
unknown

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25774..26268
DNA (495bp) protein (165aa)

This feature has no annotations

S_p1_S3_coassembly_k141_406788_23
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

26319..28013
DNA (1695bp) protein (565aa)
flagellar hook protein FlgK Tax=Geovibrio thiophilus RepID=UPI0003B42984
flgK; flagellar hook-associated protein 1 FlgK
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_406788_24
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28035..29279
DNA (1245bp) protein (415aa)
flagellin and related hook-associated proteins Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI000262839D
flagellar hook-associated protein 3
Tax=RBG_13_Deltaproteobacteria_47_9_curated
S_p1_S3_coassembly_k141_406788_25
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

29656..29889
DNA (234bp) protein (78aa)
carbon storage regulator Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI000262839C
hypothetical protein
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_406788_26
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

29975..30481
DNA (507bp) protein (169aa)
flagellar assembly protein FliW Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI000262839B
fliW; flagellar assembly protein FliW
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_406788_27
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30833..31150
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR81_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV35762.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Displaying 28 items

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