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S_p1_S3_coassembly_k141_552177

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_552177_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..911)
DNA (909bp) protein (303aa)
fadB; multifunctional fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8)
multifunctional fatty acid oxidation complex subunit alpha Tax=Pseudomonas thermotolerans RepID=UPI000370FBCE
Fatty acid oxidation complex subunit alpha {ECO:0000256|HAMAP-Rule:MF_01621, ECO:0000256|SAAS:SAAS00051741}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
S_p1_S3_coassembly_k141_552177_2
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1079..2323
DNA (1245bp) protein (415aa)
Uncharacterized protein Tax=delta proteobacterium MLMS-1 RepID=Q1NQ23_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EAT03815.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
ATPase
S_p1_S3_coassembly_k141_552177_3
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

2320..2982
DNA (663bp) protein (221aa)
Uncharacterized protein Tax=Amphimedon queenslandica RepID=I1EQD3_AMPQE
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
S_p1_S3_coassembly_k141_552177_4
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

2987..4636
DNA (1650bp) protein (550aa)
Putative Mg-protoporphyrin IX monomethyl ester oxidative cyclase Tax=Nitrospina gracilis 3/211 RepID=M1ZCJ1_9BACT
Putative Mg-protoporphyrin IX monomethyl ester oxidative cyclase {ECO:0000313|EMBL:CCQ91076.1}; species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
radical SAM protein
S_p1_S3_coassembly_k141_552177_5
R_OP3X_45_16, OP3X, Bacteria

Not on your lists

4930..5130
DNA (201bp) protein (67aa)
preprotein translocase subunit TatA Tax=Thermodesulfatator atlanticus RepID=UPI0003B428D3
Sec-independent protein translocase protein tatA/E-like protein
Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
S_p1_S3_coassembly_k141_552177_6
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(5188..6585)
DNA (1398bp) protein (466aa)
Putative transcriptional regulator, Crp/Fnr family Tax=Leptonema illini DSM 21528 RepID=H2CAK2_9LEPT
putative transcriptional regulator, Crp/Fnr family
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_552177_7
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(6965..7243)
DNA (279bp) protein (93aa)
molybdenum cofactor biosynthesis protein MoaD Tax=SAR324 cluster RepID=UPI000288ADFE
MoaD family protein {ECO:0000313|EMBL:EDP76072.1}; species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
MoaD family protein
S_p1_S3_coassembly_k141_552177_8
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(7325..8266)
DNA (942bp) protein (314aa)
cysteine synthase (EC:2.5.1.47)
Cysteine synthase {ECO:0000313|EMBL:CCW34367.1}; EC=2.5.1.47 {ECO:0000313|EMBL:CCW34367.1};; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Cysteine synthase Tax=Chthonomonas calidirosea T49 RepID=S0EVI9_9BACT
S_p1_S3_coassembly_k141_552177_9
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(8859..9257)
DNA (399bp) protein (133aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002F15E70
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_552177_10
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9951..10349
DNA (399bp) protein (133aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00037711B6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB50390.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
S_p1_S3_coassembly_k141_552177_11
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10405..10659
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6QWC3_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
S_p1_S3_coassembly_k141_552177_12
unknown

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10695..11540
DNA (846bp) protein (282aa)

This feature has no annotations

S_p1_S3_coassembly_k141_552177_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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11584..12363
DNA (780bp) protein (260aa)
Short chain dehydrogenase protein bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobiaceae bacterium SG-6C genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-ketoacyl-ACP reductase
Tax=GWC2_Rokubacteria_70_16_curated
S_p1_S3_coassembly_k141_552177_14
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12598..14511
DNA (1914bp) protein (638aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
DNA primase Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002897275
dnaG; DNA primase
S_p1_S3_coassembly_k141_552177_15
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14579..16015)
DNA (1437bp) protein (479aa)
Bifunctional protein HldE {ECO:0000255|HAMAP-Rule:MF_01603}; Includes:; D-beta-D-heptose 7-phosphate kinase {ECO:0000255|HAMAP-Rule:MF_01603}; EC=2.7.1.167 {ECO:0000255|HAMAP-Rule:MF_01603};; D-beta-D-heptose 7-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_01603}; D-glycero-beta-D-manno-heptose-7-phosphate kinase {ECO:0000255|HAMAP-Rule:MF_01603}; Includes:; D-beta-D-heptose 1-phosphate adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_01603}; EC=2.7.7.70 {ECO:0000255|HAMAP-Rule:MF_01603};; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_01603}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
Bifunctional protein HldE Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=HLDE_GEOSL
hldE; D-glycero-D-mannoheptose-7-phosphate kinase and D-glycero-D-mannoheptose-1-phosphate adenylyltransferase
S_p1_S3_coassembly_k141_552177_16
unknown

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16246..16962
DNA (717bp) protein (239aa)

This feature has no annotations

S_p1_S3_coassembly_k141_552177_17
bacterium UASB270, Bacteria

Not on your lists

17206..18702
DNA (1497bp) protein (499aa)
protease Do (EC:3.4.21.108)
serine protease Tax=Thermodesulfatator atlanticus RepID=UPI0003B3218E
Heat shock protease DegP/HtrA {ECO:0000313|EMBL:GAK61694.1}; species="Bacteria.;" source="bacterium UASB270.;"
S_p1_S3_coassembly_k141_552177_18
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19364..20278
DNA (915bp) protein (305aa)
Chromosome segregation DNA-binding protein Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GP60_SPHAL
parB-like partition proteins
Chromosome segregation DNA-binding protein {ECO:0000313|EMBL:ABF54562.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
S_p1_S3_coassembly_k141_552177_19
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20318..22573)
DNA (2256bp) protein (752aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QEU0_9FIRM
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKP95411.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
oligopeptide/dipeptide ABC transporter ATPase
S_p1_S3_coassembly_k141_552177_20
unknown

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comp(22570..23088)
DNA (519bp) protein (173aa)

This feature has no annotations

S_p1_S3_coassembly_k141_552177_21
Capnocytophaga sp. oral taxon 863, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23336..24769
DNA (1434bp) protein (478aa)
Uncharacterized protein (Fragment) Tax=Capnocytophaga sp. oral taxon 863 str. F0517 RepID=U2C830_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI63546.1}; Flags: Fragment;; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 863 str. F0517.;"
S_p1_S3_coassembly_k141_552177_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(24820..25680)
DNA (861bp) protein (287aa)
hypothetical protein Tax=Burkholderia sp. JPY347 RepID=UPI00035D2A38
carboxyvinyl-carboxyphosphonate phosphorylmutase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
S_p1_S3_coassembly_k141_552177_23
unknown

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26157..26237
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 23 items

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