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S_p1_S3_coassembly_k141_718056

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_718056_1
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..366)
DNA (366bp) protein (122aa)
Methyltransferase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYD0_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:KIG12707.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
methyltransferase
S_p1_S3_coassembly_k141_718056_2
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

538..2010
DNA (1473bp) protein (491aa)
hypothetical protein Tax=Sphingomonas melonis RepID=UPI00037F6E26
adenine specific DNA methylase Mod
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
S_p1_S3_coassembly_k141_718056_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2062..2655)
DNA (594bp) protein (198aa)
Glutamine amidotransferase subunit PdxT Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WWZ7_ACISM
SNO glutamine amidotransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
S_p1_S3_coassembly_k141_718056_4
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(2658..3536)
DNA (879bp) protein (293aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum.;"
Pyridoxal biosynthesis lyase PdxS Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJC7_9BACT
pyridoxal phosphate synthase yaaD subunit
S_p1_S3_coassembly_k141_718056_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3652..5235)
DNA (1584bp) protein (528aa)
DNA-binding HTH domain-and aminotransferase domain-containing transcriptional regulator Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIX6_CHLTF
DNA-binding HTH domain- and aminotransferase domain-containing transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
S_p1_S3_coassembly_k141_718056_6
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5514..7103)
DNA (1590bp) protein (530aa)
peptide ABC transporter substrate-binding protein Tax=Bradyrhizobium japonicum RepID=UPI00036DF7C8
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EHR06442.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
ABC transporter peptide-binding protein
S_p1_S3_coassembly_k141_718056_7
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7428..8291)
DNA (864bp) protein (288aa)
carboxyvinyl-carboxyphosphonate phosphorylmutase Tax=Curvibacter lanceolatus RepID=UPI0003639CCF
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:KJS46474.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
carboxyvinyl-carboxyphosphonate phosphorylmutase
S_p1_S3_coassembly_k141_718056_8
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(8338..9225)
DNA (888bp) protein (296aa)
Putative peptide ABC transporter permease protein Tax=uncultured marine bacterium MedDCM-OCT-S11-C95 RepID=D6PE72_9BACT
gsiD; glutathione transport system permease GsiD
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
S_p1_S3_coassembly_k141_718056_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9238..10194)
DNA (957bp) protein (319aa)
Putative peptide ABC transporter permease protein bin=GWF2_Methylomirabilis_70_14 species=uncultured marine bacterium MedDCM-OCT-S11-C95 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dipeptide transport system permease DppB
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_718056_10
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(10253..11857)
DNA (1605bp) protein (535aa)
Probable ABC transporter substrate binding protein Tax=alpha proteobacterium BAL199 RepID=A8U302_9PROT
ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
S_p1_S3_coassembly_k141_718056_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(12040..13083)
DNA (1044bp) protein (348aa)
putative oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
oligopeptide ABC transporter ATP-binding protein
Tax=CSP1_5_NC10
S_p1_S3_coassembly_k141_718056_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(13138..14127)
DNA (990bp) protein (330aa)
Putative ABC transporter bin=GWA2_Methylomirabilis_73_35 species=uncultured marine microorganism HF4000_010I05 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter ATPase
Tax=CSP1_5_NC10
S_p1_S3_coassembly_k141_718056_13
unknown

Not on your lists

14565..14768
DNA (204bp) protein (68aa)

This feature has no annotations

S_p1_S3_coassembly_k141_718056_14
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14765..16213)
DNA (1449bp) protein (483aa)
TRK system potassium uptake protein TrkH bin=GWF2_Bacteroidetes_38_335 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
TrkH family potassium uptake protein
Tax=GWF2_Bacteroidetes_38_335_curated
S_p1_S3_coassembly_k141_718056_15
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

comp(16338..17930)
DNA (1593bp) protein (531aa)
Outer membrane protein-like Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289D260
hypothetical protein
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_718056_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18003..18620)
DNA (618bp) protein (206aa)
glutathione S-transferase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
sspA; glutathione S-transferase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
S_p1_S3_coassembly_k141_718056_17

Not on your lists

19188..20156
DNA (969bp) protein (323aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N0K5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KKL95215.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S_p1_S3_coassembly_k141_718056_18
Absidia idahoensis, Absidia, Mucorales, Fungi

Not on your lists

20286..21260
DNA (975bp) protein (325aa)
hypothetical protein Tax=Amycolatopsis benzoatilytica RepID=UPI00037BA8F9
Uncharacterized protein {ECO:0000313|EMBL:CDS02700.1}; species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal lineages; Mucoromycotina; Mucorales; Cunninghamellaceae; Absidia.;" source="Absidia idahoensis var. thermophila.;"
hypothetical protein
S_p1_S3_coassembly_k141_718056_19
unknown

Not on your lists

comp(21482..21649)
DNA (168bp) protein (56aa)

This feature has no annotations

S_p1_S3_coassembly_k141_718056_20
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

21923..22969
DNA (1047bp) protein (349aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
uroporphyrinogen decarboxylase Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002F08FEB
S_p1_S3_coassembly_k141_718056_21
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23003..23824
DNA (822bp) protein (274aa)
Enoyl-CoA hydratase/isomerase Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZVZ8_DESOH
Uncharacterized protein {ECO:0000313|EMBL:KIE50809.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
enoyl-CoA hydratase/isomerase
S_p1_S3_coassembly_k141_718056_22
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23896..24681
DNA (786bp) protein (262aa)
Enoyl-CoA hydratase/isomerase Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FI92_DESAA
Uncharacterized protein {ECO:0000313|EMBL:KIE50809.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
enoyl-CoA hydratase/isomerase
S_p1_S3_coassembly_k141_718056_23
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

24902..25273
DNA (372bp) protein (124aa)
Putative uncharacterized protein Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W3W8_9CYAN
DNA methylase-like protein {ECO:0000313|EMBL:AKG54357.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;"
hypothetical protein
S_p1_S3_coassembly_k141_718056_24
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25459..26598
DNA (1140bp) protein (380aa)
Extracellular ligand-binding receptor Tax=Pseudomonas fulva (strain 12-X) RepID=F6A855_PSEF1
ABC transporter substrate-binding protein
Strain MEJ086 contig_108, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89652.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva.;"
S_p1_S3_coassembly_k141_718056_25
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26744..27673
DNA (930bp) protein (310aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=Magnetococcus sp. (strain MC-1) RepID=A0L4W9_MAGSM
inner-membrane translocator
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ABK43012.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).;"
S_p1_S3_coassembly_k141_718056_26
Pseudomonas batumici, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27706..28584
DNA (879bp) protein (293aa)
ABC-type branched-chain amino acid transport system, permease component Tax=Pseudomonas sp. GM102 RepID=J2V605_9PSED
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:KIH85576.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;"
inner-membrane translocator
Displaying 26 items

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