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S_p1_S3_coassembly_k141_743523

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_743523_1
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..145
DNA (144bp) protein (48aa)
hydrolase Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036D89AF
hydrolase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
S_p1_S3_coassembly_k141_743523_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

203..1369
DNA (1167bp) protein (389aa)
enolase Tax=Acidovorax sp. MR-S7 RepID=UPI000377BCC5
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily {ECO:0000313|EMBL:GAD24764.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
Mandelate racemase/muconate lactonizing protein
S_p1_S3_coassembly_k141_743523_3
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1870..2277)
DNA (408bp) protein (136aa)
Hemerythrin-like metal-binding protein Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z390_DESAT
hemerythrin-like metal-binding protein
Hemerythrin-like metal-binding protein {ECO:0000313|EMBL:ADH86015.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
S_p1_S3_coassembly_k141_743523_4
Methylococcaceae bacterium Sn10-6, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2533..2796)
DNA (264bp) protein (88aa)
Uncharacterized protein Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UKE9_CYAP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJV05325.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae.;" source="Methylococcaceae bacterium Sn10-6.;"
S_p1_S3_coassembly_k141_743523_trna_3
unknown

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comp(3040..3113)
DNA (74bp)
transferRNA Pro
S_p1_S3_coassembly_k141_743523_trna_2
unknown

Not on your lists

comp(3288..3359)
DNA (72bp)
transferRNA Arg
S_p1_S3_coassembly_k141_743523_5
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

3584..5788
DNA (2205bp) protein (735aa)
PAS/PAC sensor signal transduction histidine kinase Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI00028978C5
multi-sensor signal transduction histidine kinase
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_743523_6
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5858..7288
DNA (1431bp) protein (477aa)
Sigma-54-dependent transcriptional response regulator Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A223_PELCD
sigma-54-dependent transcriptional response regulator
Sigma-54-dependent transcriptional response regulator {ECO:0000313|EMBL:ABA89584.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
S_p1_S3_coassembly_k141_743523_7
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7299..8063
DNA (765bp) protein (255aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
16S ribosomal RNA methyltransferase RsmE Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002896EB2
hypothetical protein
S_p1_S3_coassembly_k141_743523_8
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8331..8600
DNA (270bp) protein (90aa)
ThiamineS protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULM3_ANASK
ThiS family protein {ECO:0000313|EMBL:GAO02654.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
sulfur transfer protein ThiS
S_p1_S3_coassembly_k141_743523_9
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(9040..9828)
DNA (789bp) protein (263aa)
Tax=RIFOXYC12_FULL_TA06_54_24_curated
S_p1_S3_coassembly_k141_743523_10
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9964..10917)
DNA (954bp) protein (318aa)
Protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUU0_GRABC
Tax=RBG_16_Gamma2_64_11_curated
S_p1_S3_coassembly_k141_743523_11
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10944..13421)
DNA (2478bp) protein (826aa)
Putative uncharacterized protein Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QNU2_BRESC
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
S_p1_S3_coassembly_k141_743523_12
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13418..14305)
DNA (888bp) protein (296aa)
Epoxide hydrolase (EC:3.3.2.9)
Epoxide hydrolase Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUT8_GRABC
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
S_p1_S3_coassembly_k141_743523_13
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(14574..15485)
DNA (912bp) protein (304aa)
Peptidase M23 Tax=Nitrospina gracilis 3/211 RepID=M1YLF9_9BACT
Peptidase, M23/M37 family
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
S_p1_S3_coassembly_k141_743523_trna_1
unknown

Not on your lists

comp(16026..16099)
DNA (74bp)
transferRNA Pro
S_p1_S3_coassembly_k141_743523_14
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16214..17176)
DNA (963bp) protein (321aa)
Selenide, water dikinase Tax=Desulfococcus multivorans DSM 2059 RepID=S7U0Z3_DESML
Selenide, water dikinase {ECO:0000313|EMBL:EPR43007.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
selD; selenide, water dikinase
S_p1_S3_coassembly_k141_743523_15
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(17376..18416)
DNA (1041bp) protein (347aa)
pseudouridine synthase, RluA family protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627BD5
pseudouridine synthase, RluA family
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_743523_16
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18469..19425)
DNA (957bp) protein (319aa)
Pyruvate carboxyltransferase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LX52_HALO1
pyruvate carboxyltransferase
Pyruvate carboxyltransferase {ECO:0000313|EMBL:ACY16094.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
S_p1_S3_coassembly_k141_743523_17
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19751..20449
DNA (699bp) protein (233aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000255|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; Short=PIMT {ECO:0000255|HAMAP-Rule:MF_00090};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Protein-L-isoaspartate O-methyltransferase Tax=Geobacter metallireducens RepID=PIMT_GEOMG
pcm; protein-L-isoaspartate O-methyltransferase
S_p1_S3_coassembly_k141_743523_18
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20571..21020
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IJ06_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB61701.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
S_p1_S3_coassembly_k141_743523_19
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(21031..22338)
DNA (1308bp) protein (436aa)
LolC/E family lipoprotein releasing system, transmembrane protein Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002889B18
LolC/E family lipoprotein releasing system, transmembrane protein
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_743523_20
unknown

Not on your lists

comp(22588..23001)
DNA (414bp) protein (138aa)

This feature has no annotations

S_p1_S3_coassembly_k141_743523_21
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

Not on your lists

23884..27057
DNA (3174bp) protein (1058aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Uncharacterized protein (Fragment) Tax=Amphimedon queenslandica RepID=I1F0Q7_AMPQE
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15709637}; species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
S_p1_S3_coassembly_k141_743523_22
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27113..28249
DNA (1137bp) protein (379aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
5-formyltetrahydrofolate cyclo-ligase Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2J7_9PROT
5-formyltetrahydrofolate cyclo-ligase
S_p1_S3_coassembly_k141_743523_23
unknown

Not on your lists

comp(28246..28518)
DNA (273bp) protein (91aa)

This feature has no annotations

S_p1_S3_coassembly_k141_743523_24
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28765..29805
DNA (1041bp) protein (347aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX05994.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
2-nitropropane dioxygenase NPD bin=GWC2_Methylomirabilis_70_16 species=Caulobacter segnis genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Displaying 27 items

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