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S_p1_S3_coassembly_k141_1172319

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1172319_1
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(3..671)
DNA (669bp) protein (223aa)
Glutamyl-tRNA reductase Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=HEM1_PELCD
hemA; glutamyl-tRNA reductase
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_1172319_2
uncultured delta proteobacterium HF0500_03A04, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

871..1461
DNA (591bp) protein (197aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002DE5BC6
Phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:ADI19314.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; environmental samples.;" source="uncultured delta proteobacterium HF0500_03A04.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
S_p1_S3_coassembly_k141_1172319_3
Synechococcus sp. RCC307, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1511..1801
DNA (291bp) protein (97aa)
putative pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434, ECO:0000313|EMBL:CAK27803.1}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434, ECO:0000313|EMBL:CAK27803.1};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain RCC307).;"
Putative pterin-4-alpha-carbinolamine dehydratase Tax=Synechococcus sp. (strain RCC307) RepID=A5GSE4_SYNR3
S_p1_S3_coassembly_k141_1172319_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1899..3134)
DNA (1236bp) protein (412aa)
Isocitrate lyase Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYF1_THERP
isocitrate lyase
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
S_p1_S3_coassembly_k141_1172319_5
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3221..4885)
DNA (1665bp) protein (555aa)
aceB; malate synthase A (EC:2.3.3.9)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
malate synthase Tax=Salisaeta longa RepID=UPI0003B51F7A
S_p1_S3_coassembly_k141_1172319_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5389..6915
DNA (1527bp) protein (509aa)
Transcriptional regulator, XRE family Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFV6_RHOMR
Uncharacterized protein {ECO:0000313|EMBL:ETW97590.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
putative transcriptional regulator
S_p1_S3_coassembly_k141_1172319_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6937..8379)
DNA (1443bp) protein (481aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000371C204
2-methylcitrate dehydratase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S_p1_S3_coassembly_k141_1172319_8
uncultured delta proteobacterium HF0130_19C20, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8529..10469)
DNA (1941bp) protein (647aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI00036280CD
Putative uncharacterized protein {ECO:0000313|EMBL:ADI17593.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; environmental samples.;" source="uncultured delta proteobacterium HF0130_19C20.;"
Zinc finger-domain-containing protein
S_p1_S3_coassembly_k141_1172319_9
unknown

Not on your lists

comp(10502..10798)
DNA (297bp) protein (99aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1172319_10
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11076..11810
DNA (735bp) protein (245aa)
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:KHF36648.1}; EC=3.1.4.46 {ECO:0000313|EMBL:KHF36648.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P1XP2.;"
hypothetical protein Tax=Cohnella laeviribosi RepID=UPI00036CED6E
glycerophosphoryl diester phosphodiesterase
S_p1_S3_coassembly_k141_1172319_11
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(11837..12640)
DNA (804bp) protein (268aa)
Adenylate/guanylate cyclase with Chase sensor bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
adenylate/guanylate cyclase domain-containing protein
Tax=RBG_16_Spirochaete_67_19_curated
S_p1_S3_coassembly_k141_1172319_12
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(12637..13710)
DNA (1074bp) protein (358aa)
Tax=RBG_16_Spirochaete_67_19_curated
S_p1_S3_coassembly_k141_1172319_13
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13981..15060)
DNA (1080bp) protein (360aa)
Putative uncharacterized protein Tax=Dehalococcoides sp. (strain BAV1) RepID=A5FSZ2_DEHSB
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
S_p1_S3_coassembly_k141_1172319_14
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15339..15551)
DNA (213bp) protein (71aa)
Putative uncharacterized protein Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K864_NITWC
Uncharacterized protein {ECO:0000313|EMBL:KGF71708.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy1.;"
hypothetical protein
S_p1_S3_coassembly_k141_1172319_15
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15585..16739)
DNA (1155bp) protein (385aa)
Queuine tRNA-ribosyltransferase bin=GWC2_Deltaproteobacteria_56_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
queuine tRNA-ribosyltransferase
Tax=GWB2_Deltaproteobacteria_55_19_curated
S_p1_S3_coassembly_k141_1172319_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16773..17879)
DNA (1107bp) protein (369aa)
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family bin=GWC2_Methylomirabilis_70_24 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
XshC-Cox1-family protein
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_1172319_17
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

18158..18634
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2M9R2_9ACTO
hypothetical protein
Tax=RBG_13_Chloroflexi_68_17_curated
S_p1_S3_coassembly_k141_1172319_18
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18782..19567
DNA (786bp) protein (262aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJB97643.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJB97643.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
enoyl-CoA hydratase (EC:4.2.1.17)
Uncharacterized protein Tax=Afipia clevelandensis ATCC 49720 RepID=K8PBK8_9BRAD
S_p1_S3_coassembly_k141_1172319_19
bacterium UASB270, Bacteria

Not on your lists

19921..20736
DNA (816bp) protein (272aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI000306092A
Metallophosphoesterase {ECO:0000313|EMBL:GAK61433.1}; species="Bacteria.;" source="bacterium UASB270.;"
S_p1_S3_coassembly_k141_1172319_20
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20934..21797
DNA (864bp) protein (288aa)
Putative aldolase bin=GWA2_Methylomirabilis_73_35 species=Rhodococcus opacus genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-keto-3-deoxy-L-rhamnonate aldolase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S_p1_S3_coassembly_k141_1172319_21
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21898..23622
DNA (1725bp) protein (575aa)
ABC transporter, substrate-binding protein, family 5 Tax=Bacteriovorax sp. BSW11_IV RepID=T0SSW0_9DELT
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EQC48353.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
ABC transport system, substrate-binding lipoprotein
S_p1_S3_coassembly_k141_1172319_22
bacterium UASB270, Bacteria

Not on your lists

23765..24496
DNA (732bp) protein (244aa)
outer membrane lipoprotein carrier protein LolA Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI000262676A
Outer membrane lipoprotein carrier protein {ECO:0000313|EMBL:GAK60427.1}; species="Bacteria.;" source="bacterium UASB270.;"
Outer-membrane lipoprotein carrier protein
S_p1_S3_coassembly_k141_1172319_23
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24989..25282
DNA (294bp) protein (98aa)
Signal recognition particle receptor FtsY Tax=Burkholderia sp. RPE64 RepID=R4WT28_9BURK
signal recognition particle receptor FtsY
Signal recognition particle receptor FtsY {ECO:0000313|EMBL:BAN24130.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;"
S_p1_S3_coassembly_k141_1172319_24
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25634..27229
DNA (1596bp) protein (532aa)
AMP-binding enzyme family protein Tax=Mycobacterium hassiacum DSM 44199 RepID=K5BKM8_9MYCO
AMP-binding enzyme family protein {ECO:0000313|EMBL:EKF25139.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium hassiacum DSM 44199.;"
AMP-dependent synthetase and ligase
S_p1_S3_coassembly_k141_1172319_25
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(27284..27670)
DNA (387bp) protein (129aa)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00037F6C61
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
S_p1_S3_coassembly_k141_1172319_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27709..28125)
DNA (417bp) protein (139aa)
membrane protein Tax=Brachybacterium paraconglomeratum RepID=UPI00026C7051
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AHG88364.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S_p1_S3_coassembly_k141_1172319_27
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28240..28656)
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Microbacterium maritypicum MF109 RepID=T5KF71_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM72795.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
S_p1_S3_coassembly_k141_1172319_28
unknown

Not on your lists

28862..29251
DNA (390bp) protein (130aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289D050
S_p1_S3_coassembly_k141_1172319_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29284..29844)
DNA (561bp) protein (187aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2U0_ANATU
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
S_p1_S3_coassembly_k141_1172319_30

Not on your lists

comp(29844..30653)
DNA (810bp) protein (270aa)
b-1,4-glucosyltransferase Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289CFF0
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:ADI23227.1}; species="Bacteria; environmental samples.;" source="uncultured nuHF2 cluster bacterium HF0770_13K08.;"
glycosyl transferase
Displaying items 1-30 of 35 in total

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