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S_p1_S3_coassembly_k141_1440706

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1440706_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(409..2688)
DNA (2280bp) protein (760aa)
lytic transglycosylase, catalytic Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627709
transglycosylase SLT domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
S_p1_S3_coassembly_k141_1440706_2
unknown

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2779..3414
DNA (636bp) protein (212aa)
hypothetical protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI000262770A
S_p1_S3_coassembly_k141_1440706_3
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(3425..3838)
DNA (414bp) protein (138aa)
Globin Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFB2_ROSCS
globin
Globin {ECO:0000313|EMBL:ABU57340.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
S_p1_S3_coassembly_k141_1440706_4
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

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4194..7058
DNA (2865bp) protein (955aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI000372881E
VCBS repeat-containing protein {ECO:0000313|EMBL:AFY45959.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
hypothetical protein
S_p1_S3_coassembly_k141_1440706_5
uncultured delta proteobacterium HF0130_19C20, Deltaproteobacteria, Proteobacteria, Bacteria

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7099..8481
DNA (1383bp) protein (461aa)
hypothetical protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625FB2
Putative uncharacterized protein {ECO:0000313|EMBL:ADI17584.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; environmental samples.;" source="uncultured delta proteobacterium HF0130_19C20.;"
hypothetical protein
S_p1_S3_coassembly_k141_1440706_6
Paenibacillus alvei, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8674..9666
DNA (993bp) protein (331aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus alvei DSM 29.;"
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase Gap Tax=Paenibacillus alvei RepID=K4Z9A0_PAEAL
S_p1_S3_coassembly_k141_1440706_7
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

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9916..10518
DNA (603bp) protein (201aa)
Glutathione S-transferase {ECO:0000313|EMBL:BAN70233.1}; EC=2.5.1.18 {ECO:0000313|EMBL:BAN70233.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
Glutathione S-transferase Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BFL7_9GAMM
glutathione S-transferase domain-containing protein
S_p1_S3_coassembly_k141_1440706_8
GWF2_OD1_45_11, Parcubacteria, Bacteria

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comp(10694..11911)
DNA (1218bp) protein (406aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003716E64
FAD dependent oxidoreductase {ECO:0000313|EMBL:KKT90513.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_45_11.;"
FAD dependent oxidoreductase
S_p1_S3_coassembly_k141_1440706_9
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11996..12526)
DNA (531bp) protein (177aa)
rimI; ribosomal-protein-alanine N-acetyltransferase (EC:2.3.1.128)
Alanine acetyltransferase {ECO:0000313|EMBL:AHZ23126.1}; Ribosomal-protein-alanine N-acetyltransferase {ECO:0000313|EMBL:AFK19740.1}; EC=2.3.1.128 {ECO:0000313|EMBL:AFK19740.1};; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC; 14739 / NCIMB 2177 / R-4) (Halobacterium mediterranei).;"
Ribosomal-protein-alanine N-acetyltransferase Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R680_HALMT
S_p1_S3_coassembly_k141_1440706_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(12592..13800)
DNA (1209bp) protein (403aa)
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
Phosphoglycerate kinase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGH4_RHOMR
S_p1_S3_coassembly_k141_1440706_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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14090..15124
DNA (1035bp) protein (345aa)
Transcriptional regulator, GntR family Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXL3_RUBXD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABG03865.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
S_p1_S3_coassembly_k141_1440706_12

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comp(15165..16580)
DNA (1416bp) protein (472aa)
Putative ATP synthase alpha/beta family, nucleotide-binding domain protein Tax=uncultured marine microorganism HF4000_APKG2K17 RepID=B3T6Q3_9ZZZZ
Putative ATP synthase alpha/beta family, nucleotide-binding domain protein {ECO:0000313|EMBL:ABZ08262.1}; species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG2K17.;"
flagellar protein export ATPase FliI
S_p1_S3_coassembly_k141_1440706_13

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comp(16577..17677)
DNA (1101bp) protein (367aa)
flagellar assembly protein H Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627B2A
Putative flagellar assembly protein FliH {ECO:0000313|EMBL:ABZ08263.1}; species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG2K17.;"
flagellar assembly protein
S_p1_S3_coassembly_k141_1440706_14

Not on your lists

comp(17702..19333)
DNA (1632bp) protein (544aa)
flagellar M-ring protein FliF Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002897335
Putative Secretory protein of YscJ/FliF family protein {ECO:0000313|EMBL:ABZ08264.1}; species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG2K17.;"
flagellar M-ring protein FliF
S_p1_S3_coassembly_k141_1440706_15
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(19615..19905)
DNA (291bp) protein (97aa)
flagellar hook-basal body complex subunit FliE Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627B28
flagellar hook-basal body complex subunit flie
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
S_p1_S3_coassembly_k141_1440706_16
unknown

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comp(19908..20225)
DNA (318bp) protein (106aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1440706_17
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(20403..20846)
DNA (444bp) protein (148aa)
flagellar basal body rod protein FlgC Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627B26
flgC; flagellar basal-body rod protein
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_1440706_18
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(20846..21262)
DNA (417bp) protein (139aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0003022DF2
flagellar basal-body rod protein FlgB
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_1440706_19
unknown

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comp(21408..22430)
DNA (1023bp) protein (341aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1440706_trna_1
unknown

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22739..22812
DNA (74bp)
transferRNA Arg
S_p1_S3_coassembly_k141_1440706_trna_2
unknown

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23150..23223
DNA (74bp)
transferRNA Met
Displaying 21 items

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