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S_p1_S3_coassembly_k141_1504650

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1504650_1
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(145..738)
DNA (594bp) protein (198aa)
Ferric-uptake regulator Tax=Holophaga foetida DSM 6591 RepID=H1P4V4_9BACT
FUR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
S_p1_S3_coassembly_k141_1504650_2
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1195..3144
DNA (1950bp) protein (650aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI00036A6D0B
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
htpG; chaperone protein HtpG
S_p1_S3_coassembly_k141_1504650_3
unknown

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3209..4609
DNA (1401bp) protein (467aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1504650_4
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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4705..5772
DNA (1068bp) protein (356aa)
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
S_p1_S3_coassembly_k141_1504650_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5863..7011
DNA (1149bp) protein (383aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
GTPase RsgA Tax=Paenibacillus elgii RepID=UPI000248D732
ribosome-associated GTPase
S_p1_S3_coassembly_k141_1504650_6
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7042..9465)
DNA (2424bp) protein (808aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
Putative helicase Tax=Plesiocystis pacifica SIR-1 RepID=A6GF90_9DELT
UvrD/Rep helicase family protein
S_p1_S3_coassembly_k141_1504650_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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9815..10969
DNA (1155bp) protein (385aa)
Sodium/hydrogen exchanger Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5U4_METSW
sodium/hydrogen exchanger
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
S_p1_S3_coassembly_k141_1504650_8
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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11091..11756
DNA (666bp) protein (222aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
Carbonic anhydrase Tax=Marichromatium purpuratum 984 RepID=F9TZL1_MARPU
carbonic anhydrase
S_p1_S3_coassembly_k141_1504650_9
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12048..13034)
DNA (987bp) protein (329aa)
glucokinase (EC:2.7.1.2)
Glucokinase Tax=Geitlerinema sp. PCC 7407 RepID=K9S6L4_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KFA88687.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
S_p1_S3_coassembly_k141_1504650_10
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(13163..13777)
DNA (615bp) protein (205aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000370D634
Uncharacterized protein {ECO:0000313|EMBL:EGK10277.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
hypothetical protein
S_p1_S3_coassembly_k141_1504650_11
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13798..14358)
DNA (561bp) protein (187aa)
hypothetical protein Tax=Hahella ganghwensis RepID=UPI000380A010
Putative marR-family regulatory protein {ECO:0000313|EMBL:EDP61688.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
MarR family regulatory protein
S_p1_S3_coassembly_k141_1504650_12
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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14486..15490
DNA (1005bp) protein (335aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
biotin synthase Tax=Spirosoma spitsbergense RepID=UPI00036B6B20
biotin synthase
S_p1_S3_coassembly_k141_1504650_13
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15435..16571
DNA (1137bp) protein (379aa)
bioF; 8-amino-7-oxononanoate synthase (EC:2.3.1.47)
7-KETO-8-AMINO-PELARGONIC ACID SYNTHETASE PROTEIN Tax=Rhizobium loti RepID=Q9EYU5_RHILI
7-KETO-8-AMINO-PELARGONIC ACID SYNTHETASE PROTEIN {ECO:0000313|EMBL:CAD31400.1}; BioF {ECO:0000313|EMBL:AAG47792.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (Mesorhizobium loti).;"
S_p1_S3_coassembly_k141_1504650_14

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16630..17013
DNA (384bp) protein (128aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JEY8_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH37096.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
S_p1_S3_coassembly_k141_1504650_15
Synechococcus elongatus, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17136..17798
DNA (663bp) protein (221aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2).;"
ATP-dependent dethiobiotin synthetase BioD Tax=Synechococcus elongatus RepID=Q31SA7_SYNE7
bioD; dethiobiotin synthase
S_p1_S3_coassembly_k141_1504650_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17899..19152
DNA (1254bp) protein (418aa)
Adenosylmethionine-8-amino-7-oxononanoate transaminase Tax=Sphingomonas sp. S17 RepID=F3X288_9SPHN
adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:AHG92026.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
S_p1_S3_coassembly_k141_1504650_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19475..21940
DNA (2466bp) protein (822aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX02954.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
CoA-transferase family iii bin=bin7_NC10_sister species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
caib/baif family protein
S_p1_S3_coassembly_k141_1504650_18

Not on your lists

comp(21981..22820)
DNA (840bp) protein (280aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.17)
enoyl-CoA hydratase Tax=Pseudomonas pelagia RepID=UPI00039D1EBF
Uncharacterized protein {ECO:0000313|EMBL:KKN93170.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_1504650_19
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23188..24783
DNA (1596bp) protein (532aa)
ABC transporter peptide-binding protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89VQ2_BRADU
Putative ABC transporter peptide-binding protein {ECO:0000313|EMBL:KGJ65415.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
ABC transporter peptide-binding protein
S_p1_S3_coassembly_k141_1504650_20

Not on your lists

25026..26414
DNA (1389bp) protein (463aa)
adenylosuccinate lyase Tax=Rhodococcus opacus RepID=UPI00029CD27D
Lyase {ECO:0000313|EMBL:AHZ45679.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Adenylosuccinate lyase
S_p1_S3_coassembly_k141_1504650_21
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26479..27642)
DNA (1164bp) protein (388aa)
Methionine synthase, vitamin-B12 independent Tax=alpha proteobacterium BAL199 RepID=A8TLE8_9PROT
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EDP66046.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
methionine synthase II (cobalamin-independent)-like protein
S_p1_S3_coassembly_k141_1504650_22
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27870..28361)
DNA (492bp) protein (164aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=uncultured bacterium RepID=F8UVP4_9BACT
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
S_p1_S3_coassembly_k141_1504650_23
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28443..29117)
DNA (675bp) protein (225aa)
hypothetical protein Tax=Rhizobium giardinii RepID=UPI000361757D
glutathione S-transferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
S_p1_S3_coassembly_k141_1504650_24
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

29856..30185
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4ECB0_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
S_p1_S3_coassembly_k141_1504650_25
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30749..31054
DNA (306bp) protein (102aa)
Putative uncharacterized protein bin=GWD2_Nitrospirae-related_57_8 species=Marinomonas sp. MED121 genus=Marinomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
Tax=GWC2_Geobacteraceae_53_11_curated
S_p1_S3_coassembly_k141_1504650_26
unknown

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comp(31144..32028)
DNA (885bp) protein (295aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1504650_27
unknown

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comp(32037..32138)
DNA (102bp) protein (34aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1504650_28
unknown

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comp(32138..32503)
DNA (366bp) protein (122aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1504650_29
unknown

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comp(32504..32854)
DNA (351bp) protein (117aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1504650_30
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(32923..34731)
DNA (1809bp) protein (603aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DYH4_METI4
gcpE; 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase
Displaying 30 items

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