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S_p1_S3_coassembly_k141_1521964

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1521964_1
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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234..1457
DNA (1224bp) protein (408aa)
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:EST59523.1}; EC=2.6.1.1 {ECO:0000313|EMBL:EST59523.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus hauseri ZMd44.;"
Aromatic amino acid aminotransferase Tax=Proteus hauseri ZMd44 RepID=V6MVF8_PROHU
aspC; aromatic amino acid aminotransferase
S_p1_S3_coassembly_k141_1521964_2
unknown

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1596..1694
DNA (99bp) protein (33aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1521964_3
unknown

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1732..1881
DNA (150bp) protein (50aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1521964_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2229..3890
DNA (1662bp) protein (554aa)
Glutathione ABC transport system substrate binding protein GsiB bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S_p1_S3_coassembly_k141_1521964_5
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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4248..5168
DNA (921bp) protein (307aa)
Dipeptide transport system permease DppB bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
appB; ABC-type transporter, permease component: PepT family protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S_p1_S3_coassembly_k141_1521964_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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5176..6000
DNA (825bp) protein (275aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component bin=GWA2_Methylomirabilis_73_35 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
h16_A2951; ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S_p1_S3_coassembly_k141_1521964_7
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6277..7257
DNA (981bp) protein (327aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000365F9E0
oligopeptide/dipeptide ABC transporter, ATPase subunit
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S_p1_S3_coassembly_k141_1521964_8
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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7254..8225
DNA (972bp) protein (324aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035E80A3
peptide ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S_p1_S3_coassembly_k141_1521964_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8254..9468)
DNA (1215bp) protein (405aa)
Formyl-CoA transferase (EC:2.8.3.16)
hypothetical protein Tax=alpha proteobacterium SCGC AAA015-N04 RepID=UPI00037CDA81
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S_p1_S3_coassembly_k141_1521964_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9708..10514)
DNA (807bp) protein (269aa)
hypothetical protein Tax=alpha proteobacterium SCGC AAA536-K22 RepID=UPI0003B6F628
enoyl-CoA hydratase/isomerase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S_p1_S3_coassembly_k141_1521964_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11018..12676)
DNA (1659bp) protein (553aa)
2-hydroxyphytanoyl-CoA lyase Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9CJ31_CAPO3
putative oxalyl-CoA decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
S_p1_S3_coassembly_k141_1521964_12
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13406..15001)
DNA (1596bp) protein (532aa)
Drug resistance transporter, EmrB/QacA subfamily Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CK94_SYNLT
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADI03078.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
S_p1_S3_coassembly_k141_1521964_trna_1
unknown

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comp(15376..15459)
DNA (84bp)
transferRNA Leu
Displaying 13 items

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